RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 WDR41Q9HAD4 459 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 CXorf21Q9HAI6 301 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 FBXO34Q9NWN3 711 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 MAT2BQ9NZL9 334 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 VAPAQ9P0L0 249 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 ARL2BPQ9Y2Y0 163 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 DCHS2Q6V1P9 2916 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 IGHV1-45A0A0A0MS14 117 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 C9J4A7 227 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 NR5A2O00482 541 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 F10P00742 488 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 IGKV3-11P04433 115 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 HEXBP07686 556 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 HBQ1P09105 142 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 NUDT7P0C024 238 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 PRPS1L1P21108 318 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 MMP11P24347 488 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 MSX2P35548 267 aaPredicted RBP3.75□□□□□ -1.81
LIG4-201ENST00000356922 SOX11P35716 441 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 BUD31P41223 144 aaPredicted RBP3.75□□□□□ -1.81
LIG4-201ENST00000356922 HSD17B7P56937 341 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 CORO7P57737 925 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 ACTN3Q08043 901 aaPredicted RBP3.75□□□□□ -1.81
LIG4-201ENST00000356922 TERF2Q15554 542 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 NNATQ16517 81 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 ZNF628Q5EBL2 1059 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 COX20Q5RI15 118 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 CPTPQ5TA50 214 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 ZNF468Q5VIY5 522 aaPredicted RBP3.75□□□□□ -1.81
LIG4-201ENST00000356922 GKAP1Q5VSY0 366 aaPredicted RBP3.75□□□□□ -1.81
LIG4-201ENST00000356922 METTL21CQ5VZV1 264 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 B3GNTL1Q67FW5 361 aaPredicted RBP3.75□□□□□ -1.81
LIG4-201ENST00000356922 C6orf89Q6UWU4 347 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 UNQ6494/PRO21346Q6UXR6 183 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 QSOX2Q6ZRP7 698 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 SNX32Q86XE0 403 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 PROSER1Q86XN7 944 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 ZNF595Q8IYB9 648 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 ANKS4BQ8N8V4 417 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 OR8J2Q8NGG1 315 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 FBXO30Q8TB52 745 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 PNPT1Q8TCS8 783 aaKnown RBP3.75□□□□□ -1.81
LIG4-201ENST00000356922 ZNF721Q8TF20 911 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 TESCQ96BS2 214 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 NXPE2Q96DL1 559 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 ELP4Q96EB1 424 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 GIMAP5Q96F15 307 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 PHF12Q96QT6 1004 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 OR52E6Q96RD3 313 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 YIPF4Q9BSR8 244 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 DUSP26Q9BV47 211 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 NUDT9Q9BW91 350 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 PAIP1Q9H074 479 aaKnown RBP3.75□□□□□ -1.81
LIG4-201ENST00000356922 CCDC86Q9H6F5 360 aaKnown RBP3.75□□□□□ -1.81
LIG4-201ENST00000356922 WDR54Q9H977 334 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 GPN2Q9H9Y4 310 aaPredicted RBP3.75□□□□□ -1.81
LIG4-201ENST00000356922 MIEF1Q9NQG6 463 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 PRDM9Q9NQV7 894 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 P4HTMQ9NXG6 502 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.75□□□□□ -1.81
LIG4-201ENST00000356922 CDC14AQ9UNH5 594 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 PCDHB14Q9Y5E9 798 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 CSAG2Q9Y5P2 127 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 NUP210LQ5VU65 1888 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 EML6Q6ZMW3 1958 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 PCNX3Q9H6A9 2034 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 TACC2O95359 2948 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 TNRC6AQ8NDV7 1962 aaKnown RBP3.75□□□□□ -1.81
LIG4-201ENST00000356922 C17orf105B2RV13 164 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 VPS4BO75351 444 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 WISP2O76076 250 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 UNC5CO95185 931 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 CPSF4O95639 269 aaKnown RBP3.75□□□□□ -1.81
LIG4-201ENST00000356922 DRD2P14416 443 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 ACPPP15309 386 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 PORP16435 677 aaPredicted RBP3.75□□□□□ -1.81
LIG4-201ENST00000356922 TNNI3P19429 210 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 EMDP50402 254 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 NR0B1P51843 470 aaKnown RBP3.75□□□□□ -1.81
LIG4-201ENST00000356922 NCBP2P52298 156 aaKnown RBP eCLIP3.75□□□□□ -1.81
LIG4-201ENST00000356922 C21orf58P58505 322 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 TRA2BP62995 288 aaKnown RBP3.75□□□□□ -1.81
LIG4-201ENST00000356922 STX4Q12846 297 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 ZNF267Q14586 743 aaPredicted RBP3.75□□□□□ -1.81
LIG4-201ENST00000356922 MAPK11Q15759 364 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 GSTA3Q16772 222 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 SMU1Q2TAY7 513 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 CAMKMTQ7Z624 323 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 HMGN2P46Q86SG4 172 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 C9orf40Q8IXQ3 194 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 PARP9Q8IXQ6 854 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 ZNF615Q8N8J6 731 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 TANKQ92844 425 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 FKBP10Q96AY3 582 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 PPCDCQ96CD2 204 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 ZG16BQ96DA0 208 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 SPDL1Q96EA4 605 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 ARSGQ96EG1 525 aa3.75□□□□□ -1.81
LIG4-201ENST00000356922 DPH2Q9BQC3 489 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms