RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 SPATA9Q9BWV2 254 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 BHLHE41Q9C0J9 482 aaPredicted RBP9.61□□□□□ -0.87
PTPRA-203ENST00000356147 TAAR2Q9P1P5 351 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 CFAP97Q9P2B7 532 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 ITM2BQ9Y287 266 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 CIB4A0PJX0 185 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 LYRM1O43325 122 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 B4GALT2O60909 372 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 NOS1APO75052 506 aaPredicted RBP9.61□□□□□ -0.87
PTPRA-203ENST00000356147 PAHP00439 452 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 MPC1LP0DKB6 136 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 CELP19835 753 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 MMP11P24347 488 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 ERP29P30040 261 aaKnown RBP9.61□□□□□ -0.87
PTPRA-203ENST00000356147 MAPK12P53778 367 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 CSTF1Q05048 431 aaKnown RBP9.61□□□□□ -0.87
PTPRA-203ENST00000356147 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.61□□□□□ -0.87
PTPRA-203ENST00000356147 ILKQ13418 452 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 ZNF630Q2M218 657 aaPredicted RBP9.61□□□□□ -0.87
PTPRA-203ENST00000356147 ZNF284Q2VY69 593 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 PODNL1Q6PEZ8 512 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 ZER1Q7Z7L7 766 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 PEX5LQ8IYB4 626 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 OR6C4Q8NGE1 309 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 OR8J1Q8NGP2 316 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 EXOSC8Q96B26 276 aaKnown RBP9.61□□□□□ -0.87
PTPRA-203ENST00000356147 MSLNLQ96KJ4 702 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 HDHD2Q9H0R4 259 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 STMN3Q9NZ72 180 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 DSPPQ9NZW4 1301 aa9.61□□□□□ -0.87
PTPRA-203ENST00000356147 IGLV3-16A0A075B6K0 115 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 NPIPB8E9PQR5 432 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 H7C4K7 107 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 INPPL1O15357 1258 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 SEPT4O43236 478 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 LANCL1O43813 399 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 ADAP00813 363 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 IFNA14P01570 189 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 IL1AP01583 271 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 ARSBP15848 533 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 MYL12AP19105 171 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 HLA-FP30511 346 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 ZNF157P51786 506 aaPredicted RBP9.6□□□□□ -0.87
PTPRA-203ENST00000356147 MANFP55145 182 aaKnown RBP9.6□□□□□ -0.87
PTPRA-203ENST00000356147 CAP1Q01518 475 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 CRHR2Q13324 411 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 TOR1AIP1Q5JTV8 583 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 CDKL4Q5MAI5 379 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 PLEKHS1Q5SXH7 462 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 ZNF730Q6ZMV8 503 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 CCDC28AQ8IWP9 274 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 CFAP206Q8IYR0 622 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 BMPERQ8N8U9 685 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 GDPD1Q8N9F7 314 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 KLK6Q92876 244 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 MED30Q96HR3 178 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 ZNF582Q96NG8 517 aaPredicted RBP9.6□□□□□ -0.87
PTPRA-203ENST00000356147 VN1R3Q9BXE9 311 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 NLNQ9BYT8 704 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 MKRN2Q9H000 416 aaKnown RBP9.6□□□□□ -0.87
PTPRA-203ENST00000356147 TMEM38AQ9H6F2 299 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 BEX1Q9HBH7 125 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 FZD3Q9NPG1 666 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 TRPC4Q9UBN4 977 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 SEC14L3Q9UDX4 400 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 MAPRE3Q9UPY8 281 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 SPEF1Q9Y4P9 236 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 LOC105371267A0A1B0GV96 52 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 PIPSLA2A3N6 862 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 FABP7O15540 132 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 SLC28A2O43868 658 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 GREM1O60565 184 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 CATP04040 527 aaKnown RBP9.6□□□□□ -0.87
PTPRA-203ENST00000356147 URODP06132 367 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 PIPP12273 146 aaPredicted RBP9.6□□□□□ -0.87
PTPRA-203ENST00000356147 PRKAR2AP13861 404 aaKnown RBP9.6□□□□□ -0.87
PTPRA-203ENST00000356147 NPPBP16860 134 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 WDR5P61964 334 aaKnown RBP9.6□□□□□ -0.87
PTPRA-203ENST00000356147 SNRPGP62308 76 aaKnown RBP9.6□□□□□ -0.87
PTPRA-203ENST00000356147 SNRPD1P62314 119 aaKnown RBP9.6□□□□□ -0.87
PTPRA-203ENST00000356147 KIAA1161Q6NSJ0 714 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 TMEM220Q6QAJ8 160 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 PRR23CQ6ZRP0 262 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 MARCH9Q86YJ5 346 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 OR4M2Q8NGB6 313 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 RNFT2Q96EX2 444 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 GON7Q9BXV9 100 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 DMRT3Q9NQL9 472 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 CNIH4Q9P003 139 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 GULP1Q9UBP9 304 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 ATP6V1HQ9UI12 483 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 GLOD5A6NK44 160 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 A8MUA0 341 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 INMT-MINDY4F8WBC2 141 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 ZNF197O14709 1029 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 NPC1O15118 1278 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 AKAP8O43823 692 aaKnown RBP9.6□□□□□ -0.87
PTPRA-203ENST00000356147 RAB36O95755 333 aa9.6□□□□□ -0.87
PTPRA-203ENST00000356147 MYCP01106 439 aaPredicted RBP9.6□□□□□ -0.87
PTPRA-203ENST00000356147 TP53P04637 393 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms