RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 CCDC3Q9BQI4 270 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 NTN4Q9HB63 628 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 TNFRSF10DQ9UBN6 386 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 C1QTNF3-AMACRE9PGA6 284 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 QSOX1O00391 747 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 MRPL3P09001 348 aaKnown RBP13.42□□□□□ -0.26
SREBF1-202ENST00000355815 ADPRMQ3LIE5 342 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 CDKL4Q5MAI5 379 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 TMIGD1Q6UXZ0 262 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 PARGQ86W56 976 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 VWA5B2Q8N398 1253 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 TMEM145Q8NBT3 493 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 KCT2Q8NC54 265 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 PAPD5Q8NDF8 572 aaKnown RBP13.42□□□□□ -0.26
SREBF1-202ENST00000355815 ZNF740Q8NDX6 193 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 OR8K3Q8NH51 312 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 SLC35B4Q969S0 331 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 QRFPRQ96P65 431 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 F2RL3Q96RI0 385 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 AIF1LQ9BQI0 150 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 SLC29A3Q9BZD2 475 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 POLE3Q9NRF9 147 aa13.42□□□□□ -0.26
SREBF1-202ENST00000355815 ZNF705EA8MWA4 302 aaPredicted RBP13.41□□□□□ -0.26
SREBF1-202ENST00000355815 M0R036 132 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 ZNF8P17098 575 aaPredicted RBP13.41□□□□□ -0.26
SREBF1-202ENST00000355815 PIGAP37287 484 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 RPL3P39023 403 aaKnown RBP13.41□□□□□ -0.26
SREBF1-202ENST00000355815 TM4SF4P48230 202 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 ADAM8P78325 824 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 PPIGQ13427 754 aaKnown RBP eCLIP13.41□□□□□ -0.261e-7■■■□□ 17
SREBF1-202ENST00000355815 NDUFAF5Q5TEU4 345 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 ZNF551Q7Z340 670 aaPredicted RBP13.41□□□□□ -0.26
SREBF1-202ENST00000355815 FAM46DQ8NEK8 389 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 RNASE11Q8TAA1 199 aaKnown RBP13.41□□□□□ -0.26
SREBF1-202ENST00000355815 FIBINQ8TAL6 211 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 CDADC1Q9BWV3 514 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 SYNDIG1Q9H7V2 258 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 PDFQ9HBH1 243 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 TRPS1Q9UHF7 1281 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 ERVW-1Q9UQF0 538 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 PTPRFP10586 1907 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 TPRP12270 2363 aaKnown RBP13.41□□□□□ -0.26
SREBF1-202ENST00000355815 HK1P19367 917 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 CNR2P34972 360 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 TBPL1P62380 186 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 KLHL36Q8N4N3 616 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 IQCF1Q8N6M8 205 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 CIDECQ96AQ7 238 aaPredicted RBP13.41□□□□□ -0.26
SREBF1-202ENST00000355815 S100PBPQ96BU1 408 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 NUS1Q96E22 293 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 RNF31Q96EP0 1072 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 HYLS1Q96M11 299 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 OR2S2Q9NQN1 319 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 GPR52Q9Y2T5 361 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 FER1L6Q2WGJ9 1857 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 A0A0X1KG70 313 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 HIDE1A8MVS5 230 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 PRH1P02810 166 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 AP3S2P59780 193 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 IRF5Q13568 498 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 PRAMEF17Q5VTA0 474 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 DNAJC5GQ8N7S2 189 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 OR7G3Q8NG95 312 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 OR8S1Q8NH09 359 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 PIGXQ8TBF5 258 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 DNASE1L2Q92874 299 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 FAIM2Q9BWQ8 316 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 MGAT4CQ9UBM8 478 aa13.41□□□□□ -0.26
SREBF1-202ENST00000355815 CLCA1A8K7I4 914 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 TNFRSF10AO00220 468 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 PIP5K1CO60331 668 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 DNAJB5O75953 348 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 EPCAMP16422 314 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 SKP1P63208 163 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 GRIK2Q13002 908 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 SNTB2Q13425 540 aaKnown RBP13.4□□□□□ -0.26
SREBF1-202ENST00000355815 PRAMEF14Q5SWL7 426 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 PRAMEF13Q5VWM6 474 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 ZNF782Q6ZMW2 699 aaPredicted RBP13.4□□□□□ -0.26
SREBF1-202ENST00000355815 ZNF767PQ75MW2 155 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 TSPYL5Q86VY4 417 aaPredicted RBP13.4□□□□□ -0.26
SREBF1-202ENST00000355815 GEMIN6Q8WXD5 167 aaKnown RBP13.4□□□□□ -0.26
SREBF1-202ENST00000355815 NEIL2Q969S2 332 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 UBE2E3Q969T4 207 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 EID2BQ96D98 161 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 LMAN2LQ9H0V9 348 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 RNF167Q9H6Y7 350 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 FBXO10Q9UK96 956 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 C13orf42A0A1B0GVH6 325 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 TMEM221A6NGB7 291 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 PITPNM1O00562 1244 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 ARSKQ6UWY0 536 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 PEG10Q86TG7 708 aaKnown RBP13.4□□□□□ -0.26
SREBF1-202ENST00000355815 RPLP0P6Q8NHW5 317 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 CASTOR1Q8WTX7 329 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 TSEN15Q8WW01 171 aaKnown RBP13.4□□□□□ -0.26
SREBF1-202ENST00000355815 ELMOD3Q96FG2 381 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 GPN2Q9H9Y4 310 aaPredicted RBP13.4□□□□□ -0.26
SREBF1-202ENST00000355815 ACOT13Q9NPJ3 140 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 PLSCR3Q9NRY6 295 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms