RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 PLCXD1Q9NUJ7 323 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 TECPR2O15040 1411 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 J3QLW9 94 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 TAAR5O14804 337 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 KIAA0355O15063 1070 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 LILRB5O75023 590 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 ZNF19P17023 458 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 NUMBP49757 651 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 RNF4P78317 190 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 GANABQ14697 944 aaKnown RBP12.1□□□□□ -0.47
COL6A3-203ENST00000353578 HLFQ16534 295 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 NLRP8Q86W28 1048 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 CAMKVQ8NCB2 501 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 RBM18Q96H35 190 aaKnown RBP12.1□□□□□ -0.47
COL6A3-203ENST00000353578 RLIMQ9NVW2 624 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 RNF150Q9ULK6 438 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 AK1P00568 194 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 RNF151Q2KHN1 245 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 FRZBQ92765 325 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 HSD3B7Q9H2F3 369 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 OR2S2Q9NQN1 319 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 PIKFYVEQ9Y2I7 2098 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 CILPO75339 1184 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 CETPP11597 493 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 ERVK-21P61565 698 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 OR4K2Q8NGD2 314 aa12.1□□□□□ -0.47
COL6A3-203ENST00000353578 C2orf92A0A1B0GVN3 265 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 ITGA5P08648 1049 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 NUDT6P53370 316 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 FXYD6P3P58550 94 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 ZNF763Q0D2J5 394 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 ENPP2Q13822 863 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 ZNF266Q14584 549 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 CXorf40AQ8TE69 158 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 CHRDQ9H2X0 955 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 CWH43Q9H720 699 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 B3GAT2Q9NPZ5 323 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 GAR1Q9NY12 217 aaKnown RBP12.09□□□□□ -0.47
COL6A3-203ENST00000353578 KCNS2Q9ULS6 477 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 MDFIC2A0A1B0GVS7 189 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 TCRBV3S1A0A5B6 114 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 MFSD11O43934 449 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 DLX3O60479 287 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 FMO6PO60774 539 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 PPT1P50897 306 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 HBMQ6B0K9 141 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 DHRS4L2Q6PKH6 230 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 SLC22A18Q96BI1 424 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 WRAP53Q9BUR4 548 aaKnown RBP12.09□□□□□ -0.47
COL6A3-203ENST00000353578 ANKRD31Q8N7Z5 1873 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 OR2F2O95006 317 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 GPR85P60893 370 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 CDK5R2Q13319 367 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 OR2F1Q13607 317 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 LAPTM4AQ15012 233 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 OR52E4Q8NGH9 312 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 SLC6A7Q99884 636 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 HSD17B14Q9BPX1 270 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 NLE1Q9NVX2 485 aaPredicted RBP12.09□□□□□ -0.47
COL6A3-203ENST00000353578 C2CD4BA6NLJ0 364 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 B3GALT2O43825 422 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 MMP20O60882 483 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 TSSK4Q6SA08 328 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 SCIMPQ6UWF3 145 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 RD3Q7Z3Z2 195 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 SLC9B2Q86UD5 537 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 LRRC56Q8IYG6 542 aaPredicted RBP12.09□□□□□ -0.47
COL6A3-203ENST00000353578 ENTHD1Q8IYW4 607 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 MOCOSQ96EN8 888 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 TECTBQ96PL2 329 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 OR4F21O95013 312 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 PCDH8O95206 1070 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 CSNK2A2P19784 350 aaPredicted RBP12.09□□□□□ -0.47
COL6A3-203ENST00000353578 CMPK1P30085 196 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 ZNF586Q9NXT0 402 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 DTLQ9NZJ0 730 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 NFKBIEO00221 500 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 ARSBP15848 533 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 TMEM198Q66K66 360 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 SYT13Q7L8C5 426 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 CAPN14A8MX76 684 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 GIPP09681 153 aaPredicted RBP12.09□□□□□ -0.47
COL6A3-203ENST00000353578 IL12BP29460 328 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 GABRA2P47869 451 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 PLA2G7Q13093 441 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 PPP1R3AQ16821 1122 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 HCAR2Q8TDS4 363 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 CRB3Q9BUF7 120 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 PRAMEF22A3QJZ6 481 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 TMEM200CA6NKL6 621 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 TP73O15350 636 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 RAF1P04049 648 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 PTH2RP49190 550 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 POU4F3Q15319 338 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 FAM151BQ6UXP7 276 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 OR1E3Q8WZA6 343 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 PITHD1Q9GZP4 211 aaPredicted RBP12.09□□□□□ -0.47
COL6A3-203ENST00000353578 ADAM19Q9H013 955 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 ZNF286AQ9HBT8 521 aa12.09□□□□□ -0.47
COL6A3-203ENST00000353578 D6RAR5 112 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms