RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 ANKRD60Q9BZ19 345 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 LRRN3Q9H3W5 708 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 SERINC1Q9NRX5 453 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 NXF1Q9UBU9 619 aaKnown RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 IFT52Q9Y366 437 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 SPATA31A6Q5VVP1 1343 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 KCPQ6ZWJ8 1503 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 FAM230AA0A1W2PPH8 454 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 B9A039 149 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 BCKDKO14874 412 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 OPN1MWP04001 364 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 FCER2P06734 321 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 OPN1MW2P0DN77 364 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 OPN1MW3P0DN78 364 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 GIFP27352 417 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 GPR12P47775 334 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 OR3A4PP47883 348 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 CLPPQ16740 277 aaPredicted RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 RFX4Q33E94 735 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 TEX44Q53QW1 395 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 PLA2G2CQ5R387 149 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 ANKRD26P1Q6NSI1 321 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 PGAP1Q75T13 922 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 AQP12AQ8IXF9 295 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 AADATQ8N5Z0 425 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 ZSCAN4Q8NAM6 433 aaPredicted RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 OR6S1Q8NH40 331 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 EEF1AKMT3Q96AZ1 226 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 SGPP1Q9BX95 441 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 CALHM2Q9HA72 323 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 USE1Q9NZ43 259 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 RGS17Q9UGC6 210 aaPredicted RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 POMT2Q9UKY4 750 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 CDC14AQ9UNH5 594 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 CAMTA1Q9Y6Y1 1673 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 RPS10-NUDT3A0A1W2PQS6 291 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 WDR27A2RRH5 827 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 NEMP2A6NFY4 417 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 TMEM150CB9EJG8 249 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 TPST1O60507 370 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 DUSP11O75319 330 aaKnown RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 CCNKO75909 580 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 CABYRO75952 493 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 WNT11O96014 354 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 ANXA3P12429 323 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 ARSAP15289 507 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 XRCC1P18887 633 aaPredicted RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 ATP5A1P25705 553 aaKnown RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 CAP2P40123 477 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 CD96P40200 585 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 ALDH3B2P48448 385 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 VSX2P58304 361 aaPredicted RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 DSTNP60981 165 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 RBBP4Q09028 425 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 PJVKQ0ZLH3 352 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 CYP51A1Q16850 503 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 TEPPQ6URK8 271 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 SLC26A9Q7LBE3 791 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 BMP8AQ7Z5Y6 402 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 GRASPQ7Z6J2 395 aaPredicted RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 UBE3DQ7Z6J8 389 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 FAM20CQ8IXL6 584 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 FAM126BQ8IXS8 530 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 OR1J2Q8NGS2 313 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 ANAPC13Q9BS18 74 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 OR2B2Q9GZK3 357 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 COA1Q9GZY4 146 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 LIN28AQ9H9Z2 209 aaKnown RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 NECTIN3Q9NQS3 549 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 JKAMPQ9P055 326 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 IL20RAQ9UHF4 553 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 CRLS1Q9UJA2 301 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 MRPS33Q9Y291 106 aaKnown RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 RBMX2Q9Y388 322 aaKnown RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 ZNF335Q9H4Z2 1342 aaPredicted RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 FAM74A7A6NL05 159 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 C2orf74A8MZ97 194 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 PSPNO60542 156 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 BBOX1O75936 387 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 GOT1P17174 413 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 NELFEP18615 380 aaKnown RBP5.67□□□□□ -1.5
RFC1-201ENST00000349703 NOS3P29474 1203 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 UQCRC1P31930 480 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 NAMPTP43490 491 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 FLT3LGP49771 235 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 MLLT10P55197 1068 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 SNAP25P60880 206 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 DHODHQ02127 395 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 ODF4Q2M2E3 257 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 FAM83EQ2M2I3 478 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 FAM74A3Q4VXF1 159 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 ZNF385BQ569K4 471 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 PRAMEF17Q5VTA0 474 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 PCDH20Q8N6Y1 951 aaKnown RBP5.67□□□□□ -1.5
RFC1-201ENST00000349703 ANKFN1Q8N957 763 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 VANGL1Q8TAA9 524 aaPredicted RBP5.67□□□□□ -1.5
RFC1-201ENST00000349703 LMO3Q8TAP4 145 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 CLEC4CQ8WTT0 213 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 ST6GALNAC6Q969X2 333 aa5.67□□□□□ -1.5
RFC1-201ENST00000349703 ATXN7L3BQ96GX2 97 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms