RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 MYO7AQ13402 2215 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 KPNA5O15131 536 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 CSF2P04141 144 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 HBQ1P09105 142 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 ADH5P11766 374 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 DDX5P17844 614 aaKnown RBP15.07■□□□□ 0
HMGA1-202ENST00000347617 IDSP22304 550 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 AQP1P29972 269 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 HNF1BP35680 557 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 PBX2P40425 430 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 CRATP43155 626 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 STK19P49842 368 aaPredicted RBP15.07■□□□□ 0
HMGA1-202ENST00000347617 ALDH6A1Q02252 535 aaKnown RBP15.07■□□□□ 0
HMGA1-202ENST00000347617 PTCHD3Q3KNS1 767 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 LAMTOR1Q6IAA8 161 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 MBOAT1Q6ZNC8 495 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 LAPTM4BQ86VI4 370 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 GRAMD2AQ8IUY3 354 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 Q8N402 240 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 NATD1Q8N6N6 113 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 OR4M1Q8NGD0 313 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 WDR20Q8TBZ3 569 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 ING5Q8WYH8 240 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 EID2BQ96D98 161 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 MRPL38Q96DV4 380 aaKnown RBP15.07■□□□□ 0
HMGA1-202ENST00000347617 LRRC3BQ96PB8 259 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 RANBP3Q9H6Z4 567 aaPredicted RBP15.07■□□□□ 0
HMGA1-202ENST00000347617 ELF5Q9UKW6 265 aaPredicted RBP15.07■□□□□ 0
HMGA1-202ENST00000347617 HCN2Q9UL51 889 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 RNF215Q9Y6U7 377 aa15.07■□□□□ 0
HMGA1-202ENST00000347617 MGAT4DA6NG13 374 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 SNTNA6NMZ2 147 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 GABRR3A8MPY1 467 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 H0YIV9 168 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 FAAHO00519 579 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 PCDH7O60245 1069 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 SLC19A2O60779 497 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 NFATC1O95644 943 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 C1QCP02747 245 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 OR56A5P0C7T3 313 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 MSL3P1P0C860 447 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 ARAFP10398 606 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 ARSBP15848 533 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 HK1P19367 917 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 UQCRC1P31930 480 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 RECQLP46063 649 aaPredicted RBP15.06■□□□□ 0
HMGA1-202ENST00000347617 INPP1P49441 399 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 MVDP53602 400 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 PCBP3P57721 371 aaKnown RBP15.06■□□□□ 0
HMGA1-202ENST00000347617 HOXC5Q00444 222 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 CDK6Q00534 326 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 IRF8Q02556 426 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 EEF1A2Q05639 463 aaKnown RBP15.06■□□□□ 0
HMGA1-202ENST00000347617 BAMBIQ13145 260 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 GAB1Q13480 694 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 TPBGQ13641 420 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 PDGFRLQ15198 375 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 TOR2AQ5JU69 321 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 PLEKHS1Q5SXH7 462 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 KIAA1211LQ6NV74 962 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 BRAT1Q6PJG6 821 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 USP45Q70EL2 814 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 KLHDC8AQ8IYD2 350 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 FAM26EQ8N5C1 309 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 CLDN19Q8N6F1 224 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 ASB11Q8WXH4 323 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 MAL2Q969L2 176 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 OMA1Q96E52 524 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 MRGPRX3Q96LB0 322 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 QRFPRQ96P65 431 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 TMEM43Q9BTV4 400 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 TSSK6Q9BXA6 273 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 NKX2-4Q9H2Z4 354 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 SLC28A3Q9HAS3 691 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 IL26Q9NPH9 171 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 WDR70Q9NW82 654 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 GULP1Q9UBP9 304 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 NDRG2Q9UN36 371 aaKnown RBP15.06■□□□□ 0
HMGA1-202ENST00000347617 SNX11Q9Y5W9 270 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 PLXNB3Q9ULL4 1909 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 TSPAN11A1L157 253 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 WASHC1A8K0Z3 465 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 M0R129 80 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 YY2O15391 372 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 SLC22A5O76082 557 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 GASTP01350 101 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 PDGFAP04085 211 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 ANXA4P09525 319 aaPredicted RBP15.06■□□□□ 0
HMGA1-202ENST00000347617 NR2F6P10588 404 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 DGKGP49619 791 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 HEPACAMQ14CZ8 416 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 NDUFA9Q16795 377 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 HSD17B12Q53GQ0 312 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 FAM78AQ5JUQ0 283 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 HACD4Q5VWC8 232 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 TMEM215Q68D42 235 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 GRHL2Q6ISB3 625 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 QSOX2Q6ZRP7 698 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 USP30Q70CQ3 517 aa15.06■□□□□ 0
HMGA1-202ENST00000347617 ETFBKMTQ8IXQ9 262 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms