RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 DSCR3O14972 297 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 OR10H3O60404 316 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 ENTPD6O75354 484 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 ERAL1O75616 437 aaKnown RBP14.59□□□□□ -0.07
UPF3B-202ENST00000345865 PDE9AO76083 593 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 TP53P04637 393 aaPredicted RBP14.59□□□□□ -0.07
UPF3B-202ENST00000345865 H1F0P07305 194 aaKnown RBP14.59□□□□□ -0.07
UPF3B-202ENST00000345865 OSMP13725 252 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 DRD2P14416 443 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 SLC15A1P46059 708 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 RGS6P49758 472 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 TRA2BP62995 288 aaKnown RBP14.59□□□□□ -0.07
UPF3B-202ENST00000345865 RPS21P63220 83 aaKnown RBP14.59□□□□□ -0.07
UPF3B-202ENST00000345865 SGCGQ13326 291 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 DCST1Q5T197 706 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 C18orf63Q68DL7 685 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 PGBD2Q6P3X8 592 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 SYCE2Q6PIF2 218 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 CACTIN-AS1Q8N1I8 211 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 RAB42Q8N4Z0 105 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 ACOT4Q8N9L9 421 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 TMEM145Q8NBT3 493 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 MROQ9BYG7 248 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 SLC17A9Q9BYT1 436 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 DSN1Q9H410 356 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 SEMA3GQ9NS98 782 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 P2RX2Q9UBL9 471 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 TMCC3Q9ULS5 477 aa14.59□□□□□ -0.07
UPF3B-202ENST00000345865 TMEM247A6NEH6 219 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 EPOPA6NHQ4 379 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 ZW10O43264 779 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 TPST2O60704 377 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 CHRM4P08173 479 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 HSMCR30P0CW71 290 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 C8orf89P0DMQ9 161 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 NR2F1P10589 423 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 HIST1H1TP22492 207 aaPredicted RBP14.58□□□□□ -0.08
UPF3B-202ENST00000345865 UGT2B10P36537 528 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 GSTM5P46439 218 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 BCAP31P51572 246 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 SNRPNP63162 240 aaKnown RBP14.58□□□□□ -0.08
UPF3B-202ENST00000345865 ILKQ13418 452 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 KRT33BQ14525 404 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 MRM1Q6IN84 353 aaKnown RBP14.58□□□□□ -0.08
UPF3B-202ENST00000345865 ABHD17CQ6PCB6 329 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 CCDC116Q8IYX3 515 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 FAM46DQ8NEK8 389 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 OR2L3Q8NG85 312 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 GANCQ8TET4 914 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 ZNF607Q96SK3 696 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 CENPOQ9BU64 300 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 CDCA4Q9BXL8 241 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 ROGDIQ9GZN7 287 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 MTIF3Q9H2K0 278 aaKnown RBP14.58□□□□□ -0.08
UPF3B-202ENST00000345865 ANKRA2Q9H9E1 313 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 EHD3Q9NZN3 535 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 IFT52Q9Y366 437 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 PCDHGA3Q9Y5H0 932 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 KCNE3Q9Y6H6 103 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 LOC100506127A0A0U1RQW1 187 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 NARSO43776 548 aaKnown RBP14.58□□□□□ -0.08
UPF3B-202ENST00000345865 NME6O75414 186 aaPredicted RBP14.58□□□□□ -0.08
UPF3B-202ENST00000345865 EML2O95834 649 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 ATP5A1P25705 553 aaKnown RBP14.58□□□□□ -0.08
UPF3B-202ENST00000345865 SLC9A5Q14940 896 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 RPE65Q16518 533 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 UAP1L1Q3KQV9 507 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 BCDIN3DQ7Z5W3 292 aaKnown RBP14.58□□□□□ -0.08
UPF3B-202ENST00000345865 MCFD2Q8NI22 146 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 PBX4Q9BYU1 374 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 SLC25A19Q9HC21 320 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 FGF22Q9HCT0 170 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 MAN2C1Q9NTJ4 1040 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 ENOPH1Q9UHY7 261 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 DAPK2Q9UIK4 370 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 FBXW2Q9UKT8 454 aa14.58□□□□□ -0.08
UPF3B-202ENST00000345865 SH3D21A4FU49 640 aa14.57□□□□□ -0.08
UPF3B-202ENST00000345865 METTL15A6NJ78 407 aa14.57□□□□□ -0.08
UPF3B-202ENST00000345865 TLR4O00206 839 aa14.57□□□□□ -0.08
UPF3B-202ENST00000345865 PLRG1O43660 514 aaKnown RBP14.57□□□□□ -0.08
UPF3B-202ENST00000345865 AIFM1O95831 613 aa14.57□□□□□ -0.08
UPF3B-202ENST00000345865 HMGN2P05204 90 aaKnown RBP14.57□□□□□ -0.08
UPF3B-202ENST00000345865 CERS1P27544 350 aa14.57□□□□□ -0.08
UPF3B-202ENST00000345865 RAB8AP61006 207 aa14.57□□□□□ -0.08
UPF3B-202ENST00000345865 LASP1Q14847 261 aaKnown RBP14.57□□□□□ -0.08
UPF3B-202ENST00000345865 ITPRIPL2Q3MIP1 535 aa14.57□□□□□ -0.08
UPF3B-202ENST00000345865 TMEM35AQ53FP2 167 aa14.57□□□□□ -0.08
UPF3B-202ENST00000345865 ZNF776Q68DI1 518 aaPredicted RBP14.57□□□□□ -0.08
UPF3B-202ENST00000345865 DGLUCYQ7Z3D6 616 aa14.57□□□□□ -0.08
UPF3B-202ENST00000345865 TTLQ8NG68 377 aa14.57□□□□□ -0.08
UPF3B-202ENST00000345865 C16orf58Q96GQ5 468 aa14.57□□□□□ -0.08
UPF3B-202ENST00000345865 SLC6A18Q96N87 628 aa14.57□□□□□ -0.08
UPF3B-202ENST00000345865 BBS4Q96RK4 519 aa14.57□□□□□ -0.08
UPF3B-202ENST00000345865 APOOQ9BUR5 198 aa14.57□□□□□ -0.08
UPF3B-202ENST00000345865 QRSL1Q9H0R6 528 aaKnown RBP14.57□□□□□ -0.08
UPF3B-202ENST00000345865 CLN6Q9NWW5 311 aa14.57□□□□□ -0.08
UPF3B-202ENST00000345865 APOBEC3BQ9UH17 382 aaKnown RBP14.57□□□□□ -0.08
UPF3B-202ENST00000345865 NDOR1Q9UHB4 597 aa14.57□□□□□ -0.08
UPF3B-202ENST00000345865 MGAT4BQ9UQ53 548 aa14.57□□□□□ -0.08
UPF3B-202ENST00000345865 EFCAB10A6NFE3 127 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms