RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 C11orf65Q8NCR3 313 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 OR2L5Q8NG80 312 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 NFKBIDQ8NI38 313 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 CYGBQ8WWM9 190 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 OR5P2Q8WZ92 322 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 GUCD1Q96NT3 240 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 KCNC2Q96PR1 638 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 TWSG1Q9GZX9 223 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 C1GALT1Q9NS00 363 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 NDUFA13Q9P0J0 144 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 FBXW2Q9UKT8 454 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 PRELID1Q9Y255 219 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 MRPS17Q9Y2R5 130 aaKnown RBP8.72□□□□□ -1.01
ATG4A-202ENST00000345734 ATG4BQ9Y4P1 393 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 ASB4Q9Y574 426 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 A0A0J9YVX5 310 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 OR2A25A4D2G3 310 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 G3V2T6 193 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 hCG_2039718K7EN88 272 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 P2RX6O15547 441 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 NDUFS2O75306 463 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 KRT75O95678 551 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 SMIM18P0DKX4 95 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 PVRP15151 417 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 NME1P15531 152 aaKnown RBP8.72□□□□□ -1.01
ATG4A-202ENST00000345734 GSTM2P28161 218 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 FRKP42685 505 aaPredicted RBP8.72□□□□□ -1.01
ATG4A-202ENST00000345734 MAGEA2P43356 314 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 ARSFP54793 590 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 PPP1CAP62136 330 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 RPS15AP62244 130 aaKnown RBP8.72□□□□□ -1.01
ATG4A-202ENST00000345734 TRA2BP62995 288 aaKnown RBP8.72□□□□□ -1.01
ATG4A-202ENST00000345734 TUBA1BP68363 451 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 HPCAP84074 193 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 VLDLRP98155 873 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 EEF1A2Q05639 463 aaKnown RBP8.72□□□□□ -1.01
ATG4A-202ENST00000345734 SCARB2Q14108 478 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 DAG1Q14118 895 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 SLC9A5Q14940 896 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 ZNF750Q32MQ0 723 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 CNPY1Q3B7I2 92 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 ZIK1Q3SY52 487 aaPredicted RBP8.72□□□□□ -1.01
ATG4A-202ENST00000345734 SLC36A3Q495N2 470 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 CYBRD1Q53TN4 286 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 C18orf63Q68DL7 685 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 TRIM40Q6P9F5 258 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 FIGLAQ6QHK4 219 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 TUBA1AQ71U36 451 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 EIF3MQ7L2H7 374 aaKnown RBP8.72□□□□□ -1.01
ATG4A-202ENST00000345734 PARGQ86W56 976 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 SLC22A18Q96BI1 424 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 FBXL20Q96IG2 436 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 TPD52L3Q96J77 140 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 LRRC61Q9BV99 259 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 NLNQ9BYT8 704 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 ANKRD60Q9BZ19 345 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 ASPSCR1Q9BZE9 553 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 SMURF2Q9HAU4 748 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 PRDM6Q9NQX0 595 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 SIRT3Q9NTG7 399 aaPredicted RBP8.72□□□□□ -1.01
ATG4A-202ENST00000345734 POT1Q9NUX5 634 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 SMPD3Q9NY59 655 aaPredicted RBP8.72□□□□□ -1.01
ATG4A-202ENST00000345734 RPS6KA6Q9UK32 745 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 U3KQV3 271 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 CACNA1IQ9P0X4 2223 aa8.72□□□□□ -1.01
ATG4A-202ENST00000345734 VPS13AQ96RL7 3174 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 MUC3AQ02505 3323 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 A0A1W2PS29 197 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 B4DGG1 531 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 TNFSF14O43557 240 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 SH3BP5O60239 455 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 NOBOXO60393 691 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 FKBP9O95302 570 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 OPN1SWP03999 348 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 ALPLP05186 524 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 EIF2S1P05198 315 aaKnown RBP8.71□□□□□ -1.01
ATG4A-202ENST00000345734 ZNF888P0CJ79 500 aaPredicted RBP8.71□□□□□ -1.01
ATG4A-202ENST00000345734 GSTM5P46439 218 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 PRIM2P49643 509 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 ALDH3A2P51648 485 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 BTN3A2P78410 334 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 FADDQ13158 208 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 SQSTM1Q13501 440 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 FOXB2Q5VYV0 432 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 FKBP9P1Q75LS8 142 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 ASPGQ86U10 573 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 C11orf74Q86VG3 221 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 ZC3H7AQ8IWR0 971 aaKnown RBP8.71□□□□□ -1.01
ATG4A-202ENST00000345734 FAM46DQ8NEK8 389 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 BARD1Q99728 777 aaKnown RBP8.71□□□□□ -1.01
ATG4A-202ENST00000345734 GLIPR2Q9H4G4 154 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 IL1RAPQ9NPH3 570 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 C8orf4Q9NR00 106 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 INIPQ9NRY2 104 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 HRASLS2Q9NWW9 162 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 WNT16Q9UBV4 365 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 DMDP11532 3685 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 PCDH15Q96QU1 1955 aa8.71□□□□□ -1.01
ATG4A-202ENST00000345734 TP53BP1Q12888 1972 aaPredicted RBP8.71□□□□□ -1.02
ATG4A-202ENST00000345734 THADAQ6YHU6 1953 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms