RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ZIM2Q9NZV7 527 aa12.9□□□□□ -0.34
TPM4-202ENST00000344824 ADAM29Q9UKF5 820 aa12.9□□□□□ -0.34
TPM4-202ENST00000344824 B3GNT3Q9Y2A9 372 aa12.9□□□□□ -0.34
TPM4-202ENST00000344824 UBR5O95071 2799 aaPredicted RBP12.9□□□□□ -0.34
TPM4-202ENST00000344824 CAPN14A8MX76 684 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 PRKRAO75569 313 aaKnown RBP12.89□□□□□ -0.35
TPM4-202ENST00000344824 FAM58BPP0C7Q3 252 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 ICAM2P13598 275 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 HPCAL1P37235 193 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 ASMTP46597 345 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 ALDH9A1P49189 494 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 POLR2JP52435 117 aaKnown RBP12.89□□□□□ -0.35
TPM4-202ENST00000344824 HNRNPH2P55795 449 aaKnown RBP12.89□□□□□ -0.35
TPM4-202ENST00000344824 CLDN8P56748 225 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 MFAP5Q13361 173 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 ZSCAN26Q16670 478 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 PGS1Q32NB8 556 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 ATCAYQ86WG3 371 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 Q8NA96 180 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 PLPP5Q8NEB5 264 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 MAPKAP1Q9BPZ7 522 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 ROGDIQ9GZN7 287 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 CLMPQ9H6B4 373 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 MYNNQ9NPC7 610 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 NECTIN3Q9NQS3 549 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 PRDM9Q9NQV7 894 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 PRTFDC1Q9NRG1 225 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 TEX10Q9NXF1 929 aaPredicted RBP12.89□□□□□ -0.35
TPM4-202ENST00000344824 PLA2G3Q9NZ20 509 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 ESPL1Q14674 2120 aa12.89□□□□□ -0.35
TPM4-202ENST00000344824 MYOCOSA0A1B0GUC4 107 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 A0A1W2PQ72 361 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 DYTNA2CJ06 578 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 ANKRD28O15084 1053 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 COX4I1P13073 169 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 COX7A2P14406 83 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 TSFMP43897 325 aaKnown RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 ST13P50502 369 aaKnown RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 HNRNPFP52597 415 aaKnown RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 DGKQP52824 942 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 LIM2P55344 173 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 KCNK10P57789 538 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 KCNC4Q03721 635 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 INPP5JQ15735 1006 aaPredicted RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 EXT1Q16394 746 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 PLEKHN1Q494U1 663 aaPredicted RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 TIGD2Q4W5G0 525 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 ABHD17BQ5VST6 288 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 FAM91A1Q658Y4 838 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 CCDC121Q6ZUS5 278 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 FUNDC1Q8IVP5 155 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 FAM9CQ8IZT9 166 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 ZCCHC7Q8N3Z6 543 aaKnown RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 TMEM52Q8NDY8 209 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 OR7A2PQ8NGA2 310 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 ADAMTS18Q8TE60 1221 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 TM4SF18Q96CE8 201 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 IMMP1LQ96LU5 166 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 NPLQ9BXD5 320 aaPredicted RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.88□□□□□ -0.353e-9■■■□□ 17.9
TPM4-202ENST00000344824 CLK4Q9HAZ1 481 aaKnown RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 PNO1Q9NRX1 252 aaKnown RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 MRGBPQ9NV56 204 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 LYARQ9NX58 379 aaKnown RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 TAGLN3Q9UI15 199 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 SPACA6W5XKT8 324 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 FLNCQ14315 2725 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 FAM234BA2RU67 622 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 CLDN4O14493 209 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 SCAMP2O15127 329 aaKnown RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 SLC22A2O15244 555 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 SCELO95171 688 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 SNRPB2P08579 225 aaKnown RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 ESRRAP11474 423 aaPredicted RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 PRPS1L1P21108 318 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 CPN2P22792 545 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 ADSLP30566 484 aaPredicted RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 SOX11P35716 441 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 ZFP36L2P47974 494 aaKnown RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 MRPL19P49406 292 aaKnown RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 ARFIP1P53367 373 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 CLNS1AP54105 237 aaKnown RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 IRX1P78414 480 aaPredicted RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 FOXK1P85037 733 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 PLIN5Q00G26 463 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 CYLC2Q14093 348 aaPredicted RBP12.88□□□□□ -0.35
TPM4-202ENST00000344824 KRT72Q14CN4 511 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 MAPRE2Q15555 327 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 FAM174BQ3ZCQ3 159 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 VPS26BQ4G0F5 336 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 SPANXN4Q5MJ08 99 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 C18orf63Q68DL7 685 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 PLAG1Q6DJT9 500 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 FAM71E1Q6IPT2 247 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 IGFL3Q6UXB1 125 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 GPR180Q86V85 440 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 PSMF1Q92530 271 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 UCN3Q969E3 161 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 VPS33AQ96AX1 596 aa12.88□□□□□ -0.35
TPM4-202ENST00000344824 MIB2Q96AX9 1013 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms