RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 RPS6KB2Q9UBS0 482 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 MEIS3P2A8K0S8 358 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 CDIPTO14735 213 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 RAD51DO75771 328 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 KLRC1P26715 233 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 CD1CP29017 333 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 CDH5P33151 784 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PRELPP51888 382 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 EIF6P56537 245 aaKnown RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 MOGAT2Q3SYC2 334 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ALG10Q5BKT4 473 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SLC30A6Q6NXT4 461 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 USP17L6PQ6QN14 398 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 CES3Q6UWW8 571 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 C9orf40Q8IXQ3 194 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 OR9A4Q8NGU2 314 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 LIN28AQ9H9Z2 209 aaKnown RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ACSS2Q9NR19 701 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 FBXO4Q9UKT5 387 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 FFAR3O14843 346 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SLC31A2O15432 143 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PDE8BO95263 885 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PRPS1L1P21108 318 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 S100A3P33764 101 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 MC1RQ01726 317 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 IRF4Q15306 451 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 GPR19Q15760 415 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 OR2A12Q8NGT7 310 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 BCL2L14Q9BZR8 327 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 UBQLN3Q9H347 655 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 GOLT1BQ9Y3E0 138 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TAF6LQ9Y6J9 622 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 A2ML1A8K2U0 1454 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 GLTPD2A6NH11 291 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ADRB2P07550 413 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 HOXD4P09016 255 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PGCP20142 388 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 FASLGP48023 281 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 MANFP55145 182 aaKnown RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PER3P56645 1201 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 GAS6Q14393 721 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 FAM209BQ5JX69 171 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 RTL6Q6ICC9 239 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TSSK4Q6SA08 328 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 C1QL4Q86Z23 238 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM39BQ9GZU3 492 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PLEK2Q9NYT0 353 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ZMYM5Q9UJ78 669 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 FEM1BQ9UK73 627 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 BACE2Q9Y5Z0 518 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 CPS1P31327 1500 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 USP32Q8NFA0 1604 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 BTBD17A6NE02 478 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 A8MXK9 166 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ANHXE9PGG2 379 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 POU2F2P09086 479 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 C1GALT1C1LP0DN25 315 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 BATFQ16520 125 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 MAJINQ3KP22 176 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SOHLH1Q5JUK2 328 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 GSG1LQ6UXU4 331 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 REC114Q7Z4M0 266 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ABTB2Q8N961 1025 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 RNF128Q8TEB7 428 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 CDK19Q9BWU1 502 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SEMA4CQ9C0C4 833 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ARHGAP39Q9C0H5 1083 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 DUSP21Q9H596 190 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 KIR3DX1Q9H7L2 352 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SETBP1Q9Y6X0 1596 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ANKRD61A6NGH8 418 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ELOA3DA6NLF2 546 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 UBE2Q2LH0YL09 131 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 CLDN3O15551 220 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 IFNGR1P15260 489 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 BCKDHBP21953 392 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ELLP55199 621 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 HSD17B7P56937 341 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SLC9B1Q4ZJI4 515 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 HGSNATQ68CP4 663 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 NUDT18Q6ZVK8 323 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM161BQ8NDZ6 487 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ZSWIM2Q8NEG5 633 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 NFKBIDQ8NI38 313 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 MAL2Q969L2 176 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 FDXACB1Q9BRP7 624 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 NUDT9Q9BW91 350 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PXMP2Q9NR77 195 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 A0A1W2PPW3 197 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 A6NDN8 102 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PP2D1A8MPX8 630 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SNRPGP15A8MWD9 76 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SNRNP200O75643 2136 aaKnown RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SPATA31D3P0C874 917 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TFEBP19484 476 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 OR3A2P47893 321 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 CCINQ13939 588 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 CLINT1Q14677 625 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SPATA31D4Q6ZUB0 917 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 RALGPS2Q86X27 583 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms