RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 PPP1R14CQ8TAE6 165 aa16.73■□□□□ 0.27
USF2-202ENST00000343550 C16orf78Q8WTQ4 265 aa16.73■□□□□ 0.27
USF2-202ENST00000343550 THAP3Q8WTV1 239 aaPredicted RBP16.73■□□□□ 0.27
USF2-202ENST00000343550 METTL2AQ96IZ6 378 aaKnown RBP16.73■□□□□ 0.27
USF2-202ENST00000343550 PELOQ9BRX2 385 aaKnown RBP16.73■□□□□ 0.27
USF2-202ENST00000343550 FAIM2Q9BWQ8 316 aa16.73■□□□□ 0.27
USF2-202ENST00000343550 HEY2Q9UBP5 337 aa16.73■□□□□ 0.27
USF2-202ENST00000343550 TRGV8A0A0C4DH27 118 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 TMEM120BA0PK00 339 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 TMEM200CA6NKL6 621 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 RGS14O43566 566 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 ITM2AO43736 263 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 OR10H2O60403 315 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 SEC22BO75396 215 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 ZFAND5O76080 213 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 SERPINE1P05121 402 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 SLC18A1P54219 525 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 TUBA3CQ13748 450 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 TUBA3EQ6PEY2 450 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 HSDL2Q6YN16 418 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 OR2T11Q8NH01 316 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 FAM76AQ8TAV0 307 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 AGR3Q8TD06 166 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 DOK4Q8TEW6 326 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 RIT1Q92963 219 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 MARVELD3Q96A59 401 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 EBPLQ9BY08 206 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 ZNF395Q9H8N7 513 aaPredicted RBP16.72■□□□□ 0.27
USF2-202ENST00000343550 PSME2Q9UL46 239 aa16.72■□□□□ 0.27
USF2-202ENST00000343550 GABRR3A8MPY1 467 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 PRSS44E7EML9 344 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 HRKO00198 91 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 CDK2AP1O14519 115 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 DYRK3O43781 588 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 IGKV3-11P04433 115 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 IL3P08700 152 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 DRD2P14416 443 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 PORP16435 677 aaPredicted RBP16.71■□□□□ 0.27
USF2-202ENST00000343550 ALDH9A1P49189 494 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 WDR4P57081 412 aaKnown RBP16.71■□□□□ 0.27
USF2-202ENST00000343550 PMP22Q01453 160 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 SPRED3Q2MJR0 410 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.71■□□□□ 0.27
USF2-202ENST00000343550 ZNF750Q32MQ0 723 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 NOXRED1Q6NXP6 359 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 ANKRD42Q8N9B4 389 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 OR8K3Q8NH51 312 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.71■□□□□ 0.27
USF2-202ENST00000343550 TWIST2Q8WVJ9 160 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 ARL8AQ96BM9 186 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 UTP23Q9BRU9 249 aaKnown RBP16.71■□□□□ 0.27
USF2-202ENST00000343550 C20orf27Q9GZN8 174 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 LIN28AQ9H9Z2 209 aaKnown RBP16.71■□□□□ 0.27
USF2-202ENST00000343550 ARGLU1Q9NWB6 273 aaPredicted RBP16.71■□□□□ 0.27
USF2-202ENST00000343550 C1orf109Q9NX04 203 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 ANKRD10Q9NXR5 420 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 PCDHGB6Q9Y5F9 930 aa16.71■□□□□ 0.27
USF2-202ENST00000343550 TMEM114B3SHH9 223 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 CCL21O00585 134 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 LYPLA1O75608 230 aaPredicted RBP16.7■□□□□ 0.26
USF2-202ENST00000343550 WISP2O76076 250 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 CPMP14384 443 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 GRK2P25098 689 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 GSTM5P46439 218 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 ABCE1P61221 599 aaKnown RBP16.7■□□□□ 0.26
USF2-202ENST00000343550 RNF4P78317 190 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 ZNF267Q14586 743 aaPredicted RBP16.7■□□□□ 0.26
USF2-202ENST00000343550 HEPACAMQ14CZ8 416 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 AGBL2Q5U5Z8 902 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 ZNF468Q5VIY5 522 aaPredicted RBP16.7■□□□□ 0.26
USF2-202ENST00000343550 HHATQ5VTY9 493 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 SPINK14Q6IE38 97 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 HDXQ7Z353 690 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 MDS2Q8NDY4 140 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 ITLN2Q8WWU7 325 aaPredicted RBP16.7■□□□□ 0.26
USF2-202ENST00000343550 FBXL20Q96IG2 436 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 ZNF681Q96N22 645 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 SIGLEC12Q96PQ1 595 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 PAIP2Q9BPZ3 127 aaKnown RBP16.7■□□□□ 0.26
USF2-202ENST00000343550 CXorf21Q9HAI6 301 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 LRTM1Q9HBL6 345 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 MYOTQ9UBF9 498 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 SUCOQ9UBS9 1254 aaKnown RBP16.7■□□□□ 0.26
USF2-202ENST00000343550 COPS7AQ9UBW8 275 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 POLR3HQ9Y535 204 aaPredicted RBP16.7■□□□□ 0.26
USF2-202ENST00000343550 FCHO1O14526 889 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 PIP5K1BO14986 540 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 ERAL1O75616 437 aaKnown RBP16.7■□□□□ 0.26
USF2-202ENST00000343550 HSPA4LO95757 839 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 PRF1P14222 555 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 BGNP21810 368 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 TRHRP34981 398 aaPredicted RBP16.7■□□□□ 0.26
USF2-202ENST00000343550 FEN1P39748 380 aaKnown RBP16.7■□□□□ 0.26
USF2-202ENST00000343550 CA7P43166 264 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 ERVK-8P63133 956 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 RBPJQ06330 500 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 ZNF763Q0D2J5 394 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 C2orf80Q0P641 193 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 ART3Q13508 389 aa16.7■□□□□ 0.26
USF2-202ENST00000343550 RFTN2Q52LD8 501 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms