RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 C5orf46Q6UWT4 87 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 BAIAP2L2Q6UXY1 529 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 BTN2A1Q7KYR7 527 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 FAM217AQ8IXS0 508 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 SPAG16Q8N0X2 631 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 OR8J1Q8NGP2 316 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 RPLP0P6Q8NHW5 317 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 SPPL2AQ8TCT8 520 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 PCNPQ8WW12 178 aaKnown RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 SLC5A11Q8WWX8 675 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 C1GALT1C1Q96EU7 318 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 NARS2Q96I59 477 aaKnown RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 HIST1H2AHQ96KK5 128 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 CXorf58Q96LI9 332 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 HIST1H2AJQ99878 128 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 THAP7Q9BT49 309 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 SLC25A32Q9H2D1 315 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 OR51M1Q9H341 326 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 C11orf49Q9H6J7 331 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 TDRD3Q9H7E2 651 aaKnown RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 ELP3Q9H9T3 547 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 C11orf16Q9NQ32 467 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 ENAMQ9NRM1 1142 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 FAM120CQ9NX05 1096 aaKnown RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 PPP1R14DQ9NXH3 145 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 MYEF2Q9P2K5 600 aaKnown RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 EXTL2Q9UBQ6 330 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 ZNF70Q9UC06 446 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 MALT1Q9UDY8 824 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 CBLCQ9ULV8 474 aa7.74□□□□□ -1.17
ATG4A-201ENST00000343524 EXO1Q9UQ84 846 aaKnown RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 SPIN1Q9Y657 262 aaPredicted RBP7.74□□□□□ -1.17
ATG4A-201ENST00000343524 LOC285556D6RIA3 1793 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 PRR23D1E9PI22 279 aaPredicted RBP7.73□□□□□ -1.17
ATG4A-201ENST00000343524 CHST10O43529 356 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 EIF1BO60739 113 aaKnown RBP7.73□□□□□ -1.17
ATG4A-201ENST00000343524 NDUFS3O75489 264 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 HTR3BO95264 441 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 HLA-DPB1P04440 258 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 LPLP06858 475 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 HBQ1P09105 142 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 PRR23D2P0DMB1 279 aaPredicted RBP7.73□□□□□ -1.17
ATG4A-201ENST00000343524 RAB3BP20337 219 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 AHCYP23526 432 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 PTPN6P29350 595 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 IRS1P35568 1242 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 NNMTP40261 264 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 EIF1P41567 113 aaKnown RBP7.73□□□□□ -1.17
ATG4A-201ENST00000343524 KIR3DL1P43629 444 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 RFX3P48380 749 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 ARSDP51689 593 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 NR0B1P51843 470 aaKnown RBP7.73□□□□□ -1.17
ATG4A-201ENST00000343524 CDH12P55289 794 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 VSX2P58304 361 aaPredicted RBP7.73□□□□□ -1.17
ATG4A-201ENST00000343524 PITPNAQ00169 270 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 DEFA5Q01523 94 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 MC2RQ01718 297 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 SRSF11Q05519 484 aaKnown RBP7.73□□□□□ -1.17
ATG4A-201ENST00000343524 LGALS3BPQ08380 585 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 LRRC74AQ0VAA2 488 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 GRIN2CQ14957 1233 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 EXOC3L2Q2M3D2 409 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 DCAF4L1Q3SXM0 396 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 DACT2Q5SW24 774 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 HECTD3Q5T447 861 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 HAGHLQ6PII5 290 aaPredicted RBP7.73□□□□□ -1.17
ATG4A-201ENST00000343524 ABI3BPQ7Z7G0 1075 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 LDB1Q86U70 411 aaPredicted RBP7.73□□□□□ -1.17
ATG4A-201ENST00000343524 TSPAN33Q86UF1 283 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 JAZF1Q86VZ6 243 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 C12orf40Q86WS4 652 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 ARHGAP12Q8IWW6 846 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 SKA3Q8IX90 412 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 CMIPQ8IY22 773 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 LAS2Q8IYD9 372 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 SYNPOQ8N3V7 929 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 OR5M3Q8NGP4 307 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 SFT2D1Q8WV19 159 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 POF1BQ8WVV4 589 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 TM9SF4Q92544 642 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 ELMOD3Q96FG2 381 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 LCORQ96JN0 433 aaPredicted RBP7.73□□□□□ -1.17
ATG4A-201ENST00000343524 ZNF285Q96NJ3 590 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 PANX1Q96RD7 426 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 NIPSNAP1Q9BPW8 284 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 IFT27Q9BW83 186 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 TKTL2Q9H0I9 626 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 ATXN3LQ9H3M9 355 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 EVA1AQ9H8M9 152 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 ZNF334Q9HCZ1 680 aaPredicted RBP7.73□□□□□ -1.17
ATG4A-201ENST00000343524 HMX1Q9NP08 348 aaPredicted RBP7.73□□□□□ -1.17
ATG4A-201ENST00000343524 SDHAF3Q9NRP4 125 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 RNF19AQ9NV58 838 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 ZNF451Q9Y4E5 1061 aa7.73□□□□□ -1.17
ATG4A-201ENST00000343524 PCDHGA9Q9Y5G4 932 aaKnown RBP7.73□□□□□ -1.17
ATG4A-201ENST00000343524 OR7A17O14581 309 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 FPGTO14772 594 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 LDB2O43679 373 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 OR1I1O60431 355 aa7.72□□□□□ -1.17
ATG4A-201ENST00000343524 PRAMEF2O60811 474 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms