RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 OR8H3Q8N146 312 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 LRRC17Q8N6Y2 441 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 OR11H4Q8NGC9 324 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 CLP1Q92989 425 aaKnown RBP9.17□□□□□ -0.94
HOXA1-201ENST00000343060 MTERF3Q96E29 417 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 MS4A4AQ96JQ5 239 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 ZSCAN5AQ9BUG6 496 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 MED28Q9H204 178 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 C11orf49Q9H6J7 331 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 SGK2Q9HBY8 427 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 A4GALTQ9NPC4 353 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 C12orf4Q9NQ89 552 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 TAS2R7Q9NYW3 318 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 TNFRSF10DQ9UBN6 386 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 FKBP7Q9Y680 259 aa9.17□□□□□ -0.94
HOXA1-201ENST00000343060 SHISA3A0PJX4 238 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 FAM170BA6NMN3 283 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 SLC38A8A6NNN8 435 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 GTPBP1O00178 669 aaKnown RBP9.16□□□□□ -0.94
HOXA1-201ENST00000343060 LRRTM2O43300 516 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 TLX2O43763 284 aaPredicted RBP9.16□□□□□ -0.94
HOXA1-201ENST00000343060 AKAP8O43823 692 aaKnown RBP9.16□□□□□ -0.94
HOXA1-201ENST00000343060 OR10H3O60404 316 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 TSC22D2O75157 780 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 GJB5O95377 273 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 GALP22466 123 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 IL32P24001 234 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 AVPR1BP47901 424 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 INPP1P49441 399 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 CDK5Q00535 292 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 ACSM1Q08AH1 577 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 COX10Q12887 443 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 ADGRF1Q5T601 910 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 ADNP2Q6IQ32 1131 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 BRAT1Q6PJG6 821 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 UNC5DQ6UXZ4 953 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 ZNF655Q8N720 491 aaPredicted RBP9.16□□□□□ -0.94
HOXA1-201ENST00000343060 DCAF4L2Q8NA75 395 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 GALNT11Q8NCW6 608 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 TRPV1Q8NER1 839 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 OR7G3Q8NG95 312 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 ACOT12Q8WYK0 555 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 ALG14Q96F25 216 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 TOE1Q96GM8 510 aaKnown RBP9.16□□□□□ -0.94
HOXA1-201ENST00000343060 LRR1Q96L50 414 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 ZNF578Q96N58 590 aaPredicted RBP9.16□□□□□ -0.94
HOXA1-201ENST00000343060 RSPO3Q9BXY4 272 aaPredicted RBP9.16□□□□□ -0.94
HOXA1-201ENST00000343060 ERVMER34-1Q9H9K5 563 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 MYNNQ9NPC7 610 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 NMRK2Q9NPI5 230 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 SEMA3GQ9NS98 782 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 TVP23BQ9NYZ1 205 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 CBLCQ9ULV8 474 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 MAP4K5Q9Y4K4 846 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 KIF26AQ9ULI4 1882 aaPredicted RBP9.16□□□□□ -0.94
HOXA1-201ENST00000343060 GNG14A0A1W2PPG7 69 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 PRODHO43272 600 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 TSPAN9O75954 239 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 ALDH1A1P00352 501 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 IFNA7P01567 189 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 HOXD4P09016 255 aaPredicted RBP9.16□□□□□ -0.94
HOXA1-201ENST00000343060 LIMS3P0CW19 117 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 LIMS4P0CW20 117 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 CHI3L1P36222 383 aaPredicted RBP9.16□□□□□ -0.94
HOXA1-201ENST00000343060 MAPK8P45983 427 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 SMIM11AP58511 58 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 SEMG2Q02383 582 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 HSF2Q03933 536 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 BCL2L1Q07817 233 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 GPR17Q13304 367 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 MINDY4Q4G0A6 757 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 ATP13A5Q4VNC0 1218 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 KLHL12Q53G59 568 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 HACD4Q5VWC8 232 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 MFSD14CQ5VZR4 134 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 FAM71E1Q6IPT2 247 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 PRSS42Q7Z5A4 293 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 DNAJB7Q7Z6W7 309 aaPredicted RBP9.16□□□□□ -0.94
HOXA1-201ENST00000343060 TIGD4Q8IY51 512 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 IQCF1Q8N6M8 205 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 CIDECQ96AQ7 238 aaPredicted RBP9.16□□□□□ -0.94
HOXA1-201ENST00000343060 WBP1Q96G27 269 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 RADILQ96JH8 1075 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 OR2M2Q96R28 347 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 OR4K3Q96R72 315 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 SEPT5Q99719 369 aaPredicted RBP9.16□□□□□ -0.94
HOXA1-201ENST00000343060 WACQ9BTA9 647 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 MBD1Q9UIS9 605 aaPredicted RBP9.16□□□□□ -0.94
HOXA1-201ENST00000343060 NOD1Q9Y239 953 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 CCDC88CQ9P219 2028 aa9.16□□□□□ -0.94
HOXA1-201ENST00000343060 CIB4A0PJX0 185 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 AGRPO00253 132 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 KLHL18O94889 574 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 DHFRP00374 187 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 CTBP2P56545 445 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 CTAG1AP78358 180 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 MAP2K5Q13163 448 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 SNTA1Q13424 505 aa9.15□□□□□ -0.94
HOXA1-201ENST00000343060 EXOSC2Q13868 293 aaKnown RBP9.15□□□□□ -0.94
HOXA1-201ENST00000343060 GALEQ14376 348 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms