RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.93■□□□□ 0.3
SMAD4-201ENST00000342988 NDUFV2P19404 249 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 RAB6AP20340 208 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 OR10R2Q8NGX6 335 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 WFIKKN2Q8TEU8 576 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 C2orf15Q8WU43 125 aaKnown RBP16.93■□□□□ 0.3
SMAD4-201ENST00000342988 UBL7Q96S82 380 aaPredicted RBP16.93■□□□□ 0.3
SMAD4-201ENST00000342988 PRRT1Q99946 306 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 DDX4Q9NQI0 724 aaKnown RBP16.93■□□□□ 0.3
SMAD4-201ENST00000342988 CNTNAP1P78357 1384 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 PMM2O15305 246 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 PORP16435 677 aaPredicted RBP16.93■□□□□ 0.3
SMAD4-201ENST00000342988 AQP2P41181 271 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 ACDQ96AP0 544 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 GPN2Q9H9Y4 310 aaPredicted RBP16.93■□□□□ 0.3
SMAD4-201ENST00000342988 DVL1O14640 695 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 RGL2O15211 777 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 BCAS2O75934 225 aaPredicted RBP16.93■□□□□ 0.3
SMAD4-201ENST00000342988 OR4F21O95013 312 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 SPDEFO95238 335 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 LGALS2P05162 132 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 OR1D2P34982 312 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 DVL1P1P54792 670 aaPredicted RBP16.93■□□□□ 0.3
SMAD4-201ENST00000342988 BMFQ96LC9 184 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 PLEKHJ1Q9NW61 149 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 PAQR5Q9NXK6 330 aaPredicted RBP16.93■□□□□ 0.3
SMAD4-201ENST00000342988 CD300LBA8K4G0 201 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 JMJD7P0C870 316 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 MAP4K2Q12851 820 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 NADK2Q4G0N4 442 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 ACSBG2Q5FVE4 666 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 PHYHD1Q5SRE7 291 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 BRAT1Q6PJG6 821 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 SIDT2Q8NBJ9 832 aaKnown RBP16.93■□□□□ 0.3
SMAD4-201ENST00000342988 ANKRD26Q9UPS8 1709 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 TSPAN11A1L157 253 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 A8MV72 311 aaPredicted RBP16.93■□□□□ 0.3
SMAD4-201ENST00000342988 SMIM10L2AP0DMW4 78 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 SMIM10L2BP0DMW5 78 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 CDK6Q00534 326 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 OR51T1Q8NGJ9 327 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 TMBIM1Q969X1 311 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 CNTNAP3Q9BZ76 1288 aa16.93■□□□□ 0.3
SMAD4-201ENST00000342988 PPIL3Q9H2H8 161 aaKnown RBP16.93■□□□□ 0.3
SMAD4-201ENST00000342988 KCNK5O95279 499 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 UBBP0CG47 229 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 UBCP0CG48 685 aaKnown RBP16.92■□□□□ 0.3
SMAD4-201ENST00000342988 EPHA1P21709 976 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 RPS27AP62979 156 aaKnown RBP16.92■□□□□ 0.3
SMAD4-201ENST00000342988 UBA52P62987 128 aaKnown RBP16.92■□□□□ 0.3
SMAD4-201ENST00000342988 HMGCS1Q01581 520 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 IL10RBQ08334 325 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 ANKRD23Q86SG2 305 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 ISOC1Q96CN7 298 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 CTPS2Q9NRF8 586 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 SLC39A9Q9NUM3 307 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 POMT1Q9Y6A1 747 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 TRIM23P36406 574 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 C15orf54Q8N8G6 183 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 ACBD6Q9BR61 282 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 TMEM248Q9NWD8 314 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 PCDHA2Q9Y5H9 948 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 MATN3O15232 486 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 TRAF3IP2O43734 574 aaPredicted RBP16.92■□□□□ 0.3
SMAD4-201ENST00000342988 NFYBP25208 207 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 HNRNPFP52597 415 aaKnown RBP16.92■□□□□ 0.3
SMAD4-201ENST00000342988 NFATC4Q14934 902 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 FAM180BQ6P0A1 224 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 TMEM71Q6P5X7 295 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 OR4N5Q8IXE1 308 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 CMTM2Q8TAZ6 248 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 SLC7A13Q8TCU3 470 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 DNAJC27Q9NZQ0 273 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 ZDHHC11BP0C7U3 371 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 DPPA2Q7Z7J5 298 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 OR1M1Q8NGA1 313 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 MMABQ96EY8 250 aaPredicted RBP16.92■□□□□ 0.3
SMAD4-201ENST00000342988 KCND1Q9NSA2 647 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 LSM5Q9Y4Y9 91 aaKnown RBP16.92■□□□□ 0.3
SMAD4-201ENST00000342988 SLC22A31A6NKX4 558 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 IRAK2O43187 625 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 EPHA4P54764 986 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 FAM205BPQ63HN1 556 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 SUMF1Q8NBK3 374 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 UQCC2Q9BRT2 126 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 EME2A4GXA9 379 aaPredicted RBP16.92■□□□□ 0.3
SMAD4-201ENST00000342988 NAP1L6A6NFF2 107 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 PCDH17O14917 1159 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 B4GAT1O43505 415 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 OR52W1Q6IF63 320 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 ARSGQ96EG1 525 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 CSF1P09603 554 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 DDCP20711 480 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 HES5Q5TA89 166 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 DPY19L2P1Q6NXN4 242 aa16.92■□□□□ 0.3
SMAD4-201ENST00000342988 TP63Q9H3D4 680 aaPredicted RBP16.92■□□□□ 0.3
SMAD4-201ENST00000342988 TRBV23OR9-2A0A075B6M9 112 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 MEGF11A6BM72 1044 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 A8MUA0 341 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 P2RX6O15547 441 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms