RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 OR5L2Q8NGL0 311 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 GPX8Q8TED1 209 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 LPPQ93052 612 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 ZSCAN5AQ9BUG6 496 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 G6PC3Q9BUM1 346 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 OCEL1Q9H607 264 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 NMNAT1Q9HAN9 279 aaPredicted RBP3.15□□□□□ -1.9
CSMD3-202ENST00000339701 KCNMB3Q9NPA1 279 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 RBM22Q9NW64 420 aaKnown RBP eCLIP3.15□□□□□ -1.9
CSMD3-202ENST00000339701 CUEDC1Q9NWM3 386 aaPredicted RBP3.15□□□□□ -1.9
CSMD3-202ENST00000339701 GDAP2Q9NXN4 497 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 PCDHGA6Q9Y5G7 932 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 POMT1Q9Y6A1 747 aa3.15□□□□□ -1.9
CSMD3-202ENST00000339701 ALPK2Q86TB3 2170 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 OR6C70A6NIJ9 312 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 DDCP20711 480 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 PKLRP30613 574 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 BMXP51813 675 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 TAS2R20P59543 309 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 TSPAN5P62079 268 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 VLDLRP98155 873 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF404Q494X3 552 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 GLT8D1Q68CQ7 371 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 LINGO4Q6UY18 593 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 CLNKQ7Z7G1 428 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 NHLRC2Q8NBF2 726 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 CAMKVQ8NCB2 501 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 OR5T3Q8NGG3 340 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 RHEBL1Q8TAI7 183 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 SLC22A8Q8TCC7 542 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 ADAMTS16Q8TE57 1224 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 PPA2Q9H2U2 334 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 MKKSQ9NPJ1 570 aaPredicted RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 SLC39A9Q9NUM3 307 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 LUZP4Q9P127 313 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 FBXO4Q9UKT5 387 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 PCDHGA1Q9Y5H4 931 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 A0A1W2PPH5 198 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 E9PI62 339 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 NRP1O14786 923 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 RBMXL2O75526 392 aaKnown RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 PAHP00439 452 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 ASGR2P07307 311 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 C1SP09871 688 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF823P16415 610 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 C5AR1P21730 350 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 PRKAR1BP31321 381 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 MMP12P39900 470 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 HTR3AP46098 478 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 XKP51811 444 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 ARSFP54793 590 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF704Q6ZNC4 412 aaPredicted RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 HIST2H3AQ71DI3 136 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 BMP8AQ7Z5Y6 402 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 TOP6BLQ8N6T0 577 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 SLC5A5Q92911 643 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 MCEEQ96PE7 176 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 TPSD1Q9BZJ3 242 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 ULBP3Q9BZM4 244 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 KCNK13Q9HB14 408 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 CXXC1Q9P0U4 656 aaPredicted RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 TMEM98Q9Y2Y6 226 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 PLLPQ9Y342 182 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 WIF1Q9Y5W5 379 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 TRGV8A0A0C4DH27 118 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 K7EQM0 130 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 ANKRD28O15084 1053 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 MID1O15344 667 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 RNF13O43567 381 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 OR10H3O60404 316 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 C9P02748 559 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 FABP3P05413 133 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 UBL4AP11441 157 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 CEBPBP17676 345 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 CAPN3P20807 821 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 MC3RP41968 323 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 TGFBR3Q03167 851 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 TEAD2Q15562 447 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 TMEM198Q66K66 360 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 AMZ2Q86W34 360 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 ZSWIM9Q86XI8 627 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 SLC5A8Q8N695 610 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 OR51L1Q8NGJ5 315 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 M1APQ8TC57 530 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 SCGB1C1Q8TD33 95 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 NANOS1Q8WY41 292 aaKnown RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 TIMD4Q96H15 378 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 NUDT16L1Q9BRJ7 211 aaKnown RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 CLMPQ9H6B4 373 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 CARS2Q9HA77 564 aaKnown RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 SPACA1Q9HBV2 294 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 CHMP1AQ9HD42 196 aaPredicted RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 WNT16Q9UBV4 365 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 LYVE1Q9Y5Y7 322 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 A0A0D9SG52 128 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 BCKDKO14874 412 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 FGF4P08620 206 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 LINGO3P0C6S8 592 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 KCNC1P48547 511 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 PRKXP51817 358 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms