RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 MASP2O00187 686 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 HRKO00198 91 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 RNASET2O00584 256 aaKnown RBP20.68■□□□□ 0.9
SDC3-202ENST00000339394 CT62P0C5K7 136 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 SOX18P35713 384 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 UCNP55089 124 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 MGAT2Q10469 447 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 HSPB3Q12988 150 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 KLF10Q13118 480 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 ZNF267Q14586 743 aaPredicted RBP20.68■□□□□ 0.9
SDC3-202ENST00000339394 MLC1Q15049 377 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 SPRED3Q2MJR0 410 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 TIGD2Q4W5G0 525 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 ANXA8L1Q5VT79 327 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 ANKRD46Q86W74 232 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 CCDC197Q8NCU1 140 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 NFAM1Q8NET5 270 aaPredicted RBP20.68■□□□□ 0.9
SDC3-202ENST00000339394 VPS37AQ8NEZ2 397 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 SENP5Q96HI0 755 aaPredicted RBP20.68■□□□□ 0.9
SDC3-202ENST00000339394 SLC52A3Q9NQ40 469 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 MAT2BQ9NZL9 334 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 ANKRD11Q6UB99 2663 aaPredicted RBP20.68■□□□□ 0.9
SDC3-202ENST00000339394 K7ENP7 123 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 DYRK3O43781 588 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 DDAH2O95865 285 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 HPP00738 406 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 ADSLP30566 484 aaPredicted RBP20.68■□□□□ 0.9
SDC3-202ENST00000339394 GPR143P51810 404 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 KCNK10P57789 538 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 SLC26A5P58743 744 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 MRPS35P82673 323 aaKnown RBP20.68■□□□□ 0.9
SDC3-202ENST00000339394 MAP4K2Q12851 820 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 VPS26BQ4G0F5 336 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 ZNF628Q5EBL2 1059 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 DCAF10Q5QP82 559 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 INO80CQ6PI98 192 aaPredicted RBP20.68■□□□□ 0.9
SDC3-202ENST00000339394 FAM111BQ6SJ93 734 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 CLECL1Q8IZS7 167 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 B3GNT7Q8NFL0 401 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 ZFP28Q8NHY6 868 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 KAT2AQ92830 837 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 CTHRC1Q96CG8 243 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 CNPPD1Q9BV87 410 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 OR8D2Q9GZM6 311 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 MYLK2Q9H1R3 596 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 FAM120CQ9NX05 1096 aaKnown RBP20.68■□□□□ 0.9
SDC3-202ENST00000339394 PPIEQ9UNP9 301 aaKnown RBP20.68■□□□□ 0.9
SDC3-202ENST00000339394 ERVK-11Q9UQG0 969 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 POLHQ9Y253 713 aa20.68■□□□□ 0.9
SDC3-202ENST00000339394 CCDC154A6NI56 674 aa20.67■□□□□ 0.9
SDC3-202ENST00000339394 NR5A2O00482 541 aa20.67■□□□□ 0.9
SDC3-202ENST00000339394 C6orf47O95873 294 aa20.67■□□□□ 0.9
SDC3-202ENST00000339394 TMPRSS3P57727 454 aa20.67■□□□□ 0.9
SDC3-202ENST00000339394 TRMT12Q53H54 448 aaKnown RBP20.67■□□□□ 0.9
SDC3-202ENST00000339394 PLAG1Q6DJT9 500 aa20.67■□□□□ 0.9
SDC3-202ENST00000339394 GK5Q6ZS86 529 aa20.67■□□□□ 0.9
SDC3-202ENST00000339394 VWA5B2Q8N398 1253 aa20.67■□□□□ 0.9
SDC3-202ENST00000339394 MORN4Q8NDC4 146 aa20.67■□□□□ 0.9
SDC3-202ENST00000339394 SLC2A12Q8TD20 617 aa20.67■□□□□ 0.9
SDC3-202ENST00000339394 ZNF675Q8TD23 568 aa20.67■□□□□ 0.9
SDC3-202ENST00000339394 OR5P2Q8WZ92 322 aa20.67■□□□□ 0.9
SDC3-202ENST00000339394 SPDL1Q96EA4 605 aa20.67■□□□□ 0.9
SDC3-202ENST00000339394 FBXL20Q96IG2 436 aa20.67■□□□□ 0.9
SDC3-202ENST00000339394 FER1L6-AS2Q96M78 137 aa20.67■□□□□ 0.9
SDC3-202ENST00000339394 CCDC106Q9BWC9 280 aa20.67■□□□□ 0.9
SDC3-202ENST00000339394 ERVK-19Q9WJR5 959 aa20.67■□□□□ 0.9
SDC3-202ENST00000339394 MAN2B2Q9Y2E5 1009 aa20.67■□□□□ 0.9
SDC3-202ENST00000339394 PCSK5Q92824 1860 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 IGKV3-11P04433 115 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 CAPN3P20807 821 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 S1PR1P21453 382 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 GPC1P35052 558 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 HBA1P69905 142 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 CBX1P83916 185 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 EXT1Q16394 746 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 BTBD16Q32M84 506 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 TMEM107Q6UX40 140 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 ZNF321PQ8N8H1 164 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 APCDD1LQ8NCL9 501 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 OR1N1Q8NGS0 311 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 ELP4Q96EB1 424 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 LRRC37BQ96QE4 947 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 ZNF639Q9UID6 485 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 ZMIZ1Q9ULJ6 1067 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 CAPN7Q9Y6W3 813 aa20.66■□□□□ 0.9
SDC3-202ENST00000339394 ARGFXA6NJG6 315 aa20.65■□□□□ 0.9
SDC3-202ENST00000339394 SLC22A2O15244 555 aa20.65■□□□□ 0.9
SDC3-202ENST00000339394 DCTN3O75935 186 aa20.65■□□□□ 0.9
SDC3-202ENST00000339394 ICAM2P13598 275 aa20.65■□□□□ 0.9
SDC3-202ENST00000339394 MC3RP41968 323 aa20.65■□□□□ 0.9
SDC3-202ENST00000339394 CDK9P50750 372 aaKnown RBP20.65■□□□□ 0.9
SDC3-202ENST00000339394 VAC14Q08AM6 782 aa20.65■□□□□ 0.9
SDC3-202ENST00000339394 Q0VFX4 171 aa20.65■□□□□ 0.9
SDC3-202ENST00000339394 FUT7Q11130 342 aa20.65■□□□□ 0.9
SDC3-202ENST00000339394 DEFB109BQ30KR1 87 aa20.65■□□□□ 0.9
SDC3-202ENST00000339394 C6orf163Q5TEZ5 329 aa20.65■□□□□ 0.9
SDC3-202ENST00000339394 TMEM102Q8N9M5 508 aaPredicted RBP20.65■□□□□ 0.9
SDC3-202ENST00000339394 SIMC1Q8NDZ2 872 aa20.65■□□□□ 0.9
SDC3-202ENST00000339394 OR7G2Q8NG99 324 aa20.65■□□□□ 0.9
SDC3-202ENST00000339394 ZNF721Q8TF20 911 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms