RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 SLC15A3Q8IY34 581 aa13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 PLPP5Q8NEB5 264 aa13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 OR9A2Q8NGT5 310 aa13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 ZFP90Q8TF47 636 aa13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 TMEM125Q96AQ2 219 aa13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 THTPAQ9BU02 230 aa13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 THUMPD3Q9BV44 507 aaKnown RBP13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 SPRY4Q9C004 299 aa13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 CHST8Q9H2A9 424 aa13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 CXorf36Q9H7Y0 433 aa13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 TPT1P8Q9HAU6 139 aa13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 DLL3Q9NYJ7 618 aa13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 NTMQ9P121 344 aa13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 MKL2Q9ULH7 1088 aa13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 PADI2Q9Y2J8 665 aa13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 CLDN16Q9Y5I7 305 aa13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 CFAP54Q96N23 3096 aa13.62□□□□□ -0.23
NIPAL3-202ENST00000339255 TCRBV16S1A1N1A0A5B0 115 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 FAM149AA5PLN7 773 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 RBMS1P29558 406 aaKnown RBP13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 CCT3P49368 545 aaKnown RBP13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 CDK9P50750 372 aaKnown RBP13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 EEFSECP57772 596 aaKnown RBP13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 MTPNP58546 118 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 GABREP78334 506 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 DUSP2Q05923 314 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 NSDHLQ15738 373 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 GTDC1Q4AE62 458 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 ZNF628Q5EBL2 1059 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 PIGGQ5H8A4 983 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 RABL3Q5HYI8 236 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 GALNT12Q8IXK2 581 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 SHISA5Q8N114 240 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 ELP4Q96EB1 424 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 NEURL3Q96EH8 262 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 SLC46A1Q96NT5 459 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 ECSITQ9BQ95 431 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 SPATA9Q9BWV2 254 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 TRIM4Q9C037 500 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 CXorf21Q9HAI6 301 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 ADAP2Q9NPF8 381 aa13.61□□□□□ -0.23
NIPAL3-202ENST00000339255 A0A1W2PS29 197 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 IDSB3KWA1 339 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 TGFBR3LH3BV60 316 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 NME4O00746 187 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 EMC8O43402 210 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 PLOD3O60568 738 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 RECKO95980 971 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 HEXBP07686 556 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 ATXN8OSP0DMR3 200 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 HSD17B1P14061 328 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 GPX2P18283 190 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 NT5EP21589 574 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 MC3RP41968 323 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 ANXA11P50995 505 aaKnown RBP13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 MAP4K2Q12851 820 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 ELAVL1Q15717 326 aaKnown RBP13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 PRICKLE4Q2TBC4 344 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 MLIPQ5VWP3 458 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 TMEM107Q6UX40 140 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 GPR155Q7Z3F1 870 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 ULK2Q8IYT8 1036 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 OR2L13Q8N349 312 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 VWA5B2Q8N398 1253 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 METTL21AQ8WXB1 218 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 RIT1Q92963 219 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 FAM120BQ96EK7 910 aaKnown RBP13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 AURKBQ96GD4 344 aaPredicted RBP13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 MS4A4EQ96PG1 132 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 SPSB2Q99619 263 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 NRSN2Q9GZP1 204 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 KAT8Q9H7Z6 458 aaKnown RBP13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 NECTIN3Q9NQS3 549 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 ZCCHC3Q9NUD5 404 aaKnown RBP13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 DDX18Q9NVP1 670 aaKnown RBP13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 FOXJ2Q9P0K8 574 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 SPTBN2O15020 2390 aa13.6□□□□□ -0.23
NIPAL3-202ENST00000339255 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 STMND1H3BQB6 276 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 DXOO77932 396 aaKnown RBP13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 IFNA16P05015 189 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 RAB40ALP0C0E4 278 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 NQO1P15559 274 aaKnown RBP13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 SLC5A2P31639 672 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 KCNJ2P63252 427 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 TP53BP2Q13625 1128 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 SAXO2Q658L1 398 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 PGM2L1Q6PCE3 622 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 ANGPTL8Q6UXH0 198 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 SERPINA11Q86U17 422 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 NLGN4XQ8N0W4 816 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 FBXW8Q8N3Y1 598 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 NLGN4YQ8NFZ3 816 aaPredicted RBP13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 TNIP2Q8NFZ5 429 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 OR52N2Q8NGI0 321 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 CTHRC1Q96CG8 243 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 ART5Q96L15 291 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 CRB3Q9BUF7 120 aa13.59□□□□□ -0.23
NIPAL3-202ENST00000339255 ALG2Q9H553 416 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms