RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 OR4K14Q8NGD5 310 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 TREX2Q9BQ50 279 aaPredicted RBP21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 FAM118AQ9NWS6 357 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 CCDC88CQ9P219 2028 aa21.1■□□□□ 0.97
PDLIM2-203ENST00000339162 H3BNH8 94 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 FHP07954 510 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 NR2F1P10589 423 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 FPR1P21462 350 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 C6orf132Q5T0Z8 1188 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 C17orf82Q86X59 251 aaPredicted RBP21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 LRRC25Q8N386 305 aaPredicted RBP21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 NUP43Q8NFH3 380 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 OR9A4Q8NGU2 314 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 NCSTNQ92542 709 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 P2RX2Q9UBL9 471 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 ZNF451Q9Y4E5 1061 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 THADAQ6YHU6 1953 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 H0YAE9 185 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 RDH16O75452 317 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 RECKO95980 971 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 CLPTM1O96005 669 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 ATXN8OSP0DMR3 200 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 CDH15P55291 814 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 C14orf28Q4W4Y0 310 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 WDR45BQ5MNZ6 344 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 ARMC8Q8IUR7 673 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 SLC30A8Q8IWU4 369 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 OR7G2Q8NG99 324 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 COL21A1Q96P44 957 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 ZNF300Q96RE9 604 aaPredicted RBP21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 CLCA2Q9UQC9 943 aa21.09■□□□□ 0.97
PDLIM2-203ENST00000339162 CABIN1Q9Y6J0 2220 aa21.08■□□□□ 0.97
PDLIM2-203ENST00000339162 LILRA5A6NI73 299 aa21.08■□□□□ 0.97
PDLIM2-203ENST00000339162 EMC8O43402 210 aa21.08■□□□□ 0.97
PDLIM2-203ENST00000339162 MFN2O95140 757 aa21.08■□□□□ 0.97
PDLIM2-203ENST00000339162 MED26O95402 600 aa21.08■□□□□ 0.97
PDLIM2-203ENST00000339162 IGFBP5P24593 272 aa21.08■□□□□ 0.97
PDLIM2-203ENST00000339162 PRR5P85299 388 aa21.08■□□□□ 0.97
PDLIM2-203ENST00000339162 ELOAQ14241 798 aaKnown RBP21.08■□□□□ 0.97
PDLIM2-203ENST00000339162 PUM1Q14671 1186 aaKnown RBP eCLIP21.08■□□□□ 0.97
PDLIM2-203ENST00000339162 FAM111BQ6SJ93 734 aa21.08■□□□□ 0.97
PDLIM2-203ENST00000339162 SFXN5Q8TD22 340 aa21.08■□□□□ 0.97
PDLIM2-203ENST00000339162 MS4A12Q9NXJ0 267 aa21.08■□□□□ 0.97
PDLIM2-203ENST00000339162 RNF215Q9Y6U7 377 aa21.08■□□□□ 0.97
PDLIM2-203ENST00000339162 PCDH15Q96QU1 1955 aa21.08■□□□□ 0.96
PDLIM2-203ENST00000339162 RHPN2P1A8MT19 583 aa21.08■□□□□ 0.96
PDLIM2-203ENST00000339162 CASC3O15234 703 aaKnown RBP21.08■□□□□ 0.96
PDLIM2-203ENST00000339162 KHKP50053 298 aa21.08■□□□□ 0.96
PDLIM2-203ENST00000339162 FUT5Q11128 374 aa21.08■□□□□ 0.96
PDLIM2-203ENST00000339162 GANABQ14697 944 aaKnown RBP21.08■□□□□ 0.96
PDLIM2-203ENST00000339162 MANEAQ5SRI9 462 aa21.08■□□□□ 0.96
PDLIM2-203ENST00000339162 BHLHB9Q6PI77 547 aa21.08■□□□□ 0.96
PDLIM2-203ENST00000339162 OGFOD3Q6PK18 319 aa21.08■□□□□ 0.96
PDLIM2-203ENST00000339162 CA13Q8N1Q1 262 aa21.08■□□□□ 0.96
PDLIM2-203ENST00000339162 SLC25A45Q8N413 288 aa21.08■□□□□ 0.96
PDLIM2-203ENST00000339162 GPR32P1Q8NGA4 272 aa21.08■□□□□ 0.96
PDLIM2-203ENST00000339162 OR56A1Q8NGH5 318 aa21.08■□□□□ 0.96
PDLIM2-203ENST00000339162 GEMIN6Q8WXD5 167 aaKnown RBP21.08■□□□□ 0.96
PDLIM2-203ENST00000339162 RBCK1Q9BYM8 510 aa21.08■□□□□ 0.96
PDLIM2-203ENST00000339162 LRIT1Q9P2V4 623 aa21.08■□□□□ 0.96
PDLIM2-203ENST00000339162 RHCGQ9UBD6 479 aa21.08■□□□□ 0.96
PDLIM2-203ENST00000339162 IGHV5-51A0A0C4DH38 117 aa21.07■□□□□ 0.96
PDLIM2-203ENST00000339162 TMEM247A6NEH6 219 aa21.07■□□□□ 0.96
PDLIM2-203ENST00000339162 FGF17O60258 216 aa21.07■□□□□ 0.96
PDLIM2-203ENST00000339162 TFAP2AP05549 437 aa21.07■□□□□ 0.96
PDLIM2-203ENST00000339162 FESP07332 822 aa21.07■□□□□ 0.96
PDLIM2-203ENST00000339162 CYP4B1P13584 511 aa21.07■□□□□ 0.96
PDLIM2-203ENST00000339162 DHPSP49366 369 aaPredicted RBP21.07■□□□□ 0.96
PDLIM2-203ENST00000339162 CDH12P55289 794 aa21.07■□□□□ 0.96
PDLIM2-203ENST00000339162 SATL1Q86VE3 508 aa21.07■□□□□ 0.96
PDLIM2-203ENST00000339162 TSPAN14Q8NG11 270 aa21.07■□□□□ 0.96
PDLIM2-203ENST00000339162 WFDC6Q9BQY6 131 aa21.07■□□□□ 0.96
PDLIM2-203ENST00000339162 C3orf14Q9HBI5 128 aa21.07■□□□□ 0.96
PDLIM2-203ENST00000339162 LYRM4Q9HD34 91 aa21.07■□□□□ 0.96
PDLIM2-203ENST00000339162 DDX18Q9NVP1 670 aaKnown RBP21.07■□□□□ 0.96
PDLIM2-203ENST00000339162 C3orf18Q9UK00 162 aa21.07■□□□□ 0.96
PDLIM2-203ENST00000339162 LYVE1Q9Y5Y7 322 aa21.07■□□□□ 0.96
PDLIM2-203ENST00000339162 A0A0A6YYC8 382 aaPredicted RBP21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 I3L1I5 382 aaPredicted RBP21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 CYR61O00622 381 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 CD247P20963 164 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 SPIBQ01892 262 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 CWF19L1Q69YN2 538 aaKnown RBP21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 DNAJC22Q8N4W6 341 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 ATG16L2Q8NAA4 619 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 RDH12Q96NR8 316 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 OR7D2Q96RA2 312 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 GRIP2Q9C0E4 1043 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 GABARAPL1Q9H0R8 117 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 UCK1Q9HA47 277 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 CLK4Q9HAZ1 481 aaKnown RBP21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 SOHLH2Q9NX45 425 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 PCDHGB3Q9Y5G1 929 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 ORC6Q9Y5N6 252 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 DMDP11532 3685 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 NINQ8N4C6 2090 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 TNFRSF11BO00300 401 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 CHRM4P08173 479 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 CPMP14384 443 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms