RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 SERPINI1Q99574 410 aa12.3□□□□□ -0.44
NUDCD3-201ENST00000338427 SLC6A15Q9H2J7 730 aa12.3□□□□□ -0.44
NUDCD3-201ENST00000338427 EXO5Q9H790 373 aa12.3□□□□□ -0.44
NUDCD3-201ENST00000338427 CXorf21Q9HAI6 301 aa12.3□□□□□ -0.44
NUDCD3-201ENST00000338427 TMEM216Q9P0N5 145 aa12.3□□□□□ -0.44
NUDCD3-201ENST00000338427 ACAD8Q9UKU7 415 aa12.3□□□□□ -0.44
NUDCD3-201ENST00000338427 CES1P1Q9UKY3 287 aa12.3□□□□□ -0.44
NUDCD3-201ENST00000338427 CNOT11Q9UKZ1 510 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-201ENST00000338427 NFU1Q9UMS0 254 aa12.3□□□□□ -0.44
NUDCD3-201ENST00000338427 FAM215AQ9Y5M1 114 aa12.3□□□□□ -0.44
NUDCD3-201ENST00000338427 CHCHD2Q9Y6H1 151 aaPredicted RBP12.3□□□□□ -0.44
NUDCD3-201ENST00000338427 HCFC1P51610 2035 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 A0A1B0GVC2 190 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 C2orf92A0A1B0GVN3 265 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 C2orf72A6NCS6 295 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 LRRC3CA6NJW4 275 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 A8MT66 165 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 STX16-NPEPL1H3BU86 382 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 ACOT7O00154 380 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 STX16O14662 325 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 OR4F21O95013 312 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 FBXO45P0C2W1 286 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 FAM153BP0C7A2 387 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 NT5EP21589 574 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 PIK3R1P27986 724 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 HSD17B3P37058 310 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 FEN1P39748 380 aaKnown RBP12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 ADH7P40394 386 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 MAN2A2P49641 1150 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 SERPINB9P50453 376 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 WNT3P56703 355 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 PHEXP78562 749 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 TLE4Q04727 773 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 TFF3Q07654 80 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 MGAT2Q10469 447 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 BIKQ13323 160 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 HYAL4Q2M3T9 481 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 SPRED3Q2MJR0 410 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 FAM153CQ494X1 144 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 UNC50Q53HI1 259 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 RGS9BPQ6ZS82 235 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 SLC29A4Q7RTT9 530 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 NUDT13Q86X67 352 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 METTL4Q8N3J2 472 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 ZNF615Q8N8J6 731 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 ZNF441Q8N8Z8 693 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 ACBD4Q8NC06 268 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 ADCY4Q8NFM4 1077 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 OR4K14Q8NGD5 310 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 SLC22A8Q8TCC7 542 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 ZNF483Q8TF39 744 aaPredicted RBP12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 TM4SF18Q96CE8 201 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 SPOCK3Q9BQ16 436 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 MRPL57Q9BQC6 102 aaKnown RBP12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 TTYH2Q9BSA4 534 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 WDR41Q9HAD4 459 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 SLC12A4Q9UP95 1085 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 DTX4Q9Y2E6 619 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 IKBKGQ9Y6K9 419 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 POLQO75417 2590 aa12.29□□□□□ -0.44
NUDCD3-201ENST00000338427 PHF3Q92576 2039 aaKnown RBP12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 INTS1Q8N201 2190 aaKnown RBP12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 TRGV5A0A0B4J1U4 118 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 A0A0G2JNJ9 132 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 CCDC189A1A4V9 331 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 SYNDIG1LA6NDD5 238 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 GOLGA8RI6L899 631 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 DYRK3O43781 588 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 DLX3O60479 287 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 KRT38O76015 456 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 RPS17P08708 135 aaKnown RBP12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 SNRPAP09012 282 aaKnown RBP12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 CTAGE8P0CG41 777 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 ELAVL4P26378 380 aaKnown RBP12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 ACVR2AP27037 513 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 SERPINB3P29508 390 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 ARFIP1P53367 373 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 KCNJ2P63252 427 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 GALNT1Q10472 559 aaPredicted RBP12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 TBL3Q12788 808 aaKnown RBP12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 IFT88Q13099 833 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 DUSP8Q13202 625 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 EXOSC7Q15024 291 aaKnown RBP12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 SCIMPQ6UWF3 145 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 CTAGE4Q8IX94 777 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 SLC15A4Q8N697 577 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 ASB5Q8WWX0 329 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 SELENOMQ8WWX9 145 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 ADIPOR1Q96A54 375 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 ART5Q96L15 291 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 OR10A5Q9H207 317 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 MRPL46Q9H2W6 279 aaKnown RBP12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 ANKRA2Q9H9E1 313 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 ZFP64Q9NPA5 681 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 Q9UFV3 132 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 NPFFR2Q9Y5X5 522 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 OTOGQ6ZRI0 2925 aa12.28□□□□□ -0.44
NUDCD3-201ENST00000338427 A0A087WUV0 522 aaPredicted RBP12.27□□□□□ -0.45
NUDCD3-201ENST00000338427 AQP7O14520 342 aa12.27□□□□□ -0.45
NUDCD3-201ENST00000338427 ERAL1O75616 437 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms