RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 DGAT2L6Q6ZPD8 337 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 MIER2Q8N344 545 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 SLC5A8Q8N695 610 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 GLB1L3Q8NCI6 653 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 OR7G1Q8NGA0 311 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 ELP5Q8TE02 316 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 ERP27Q96DN0 273 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 WBP1Q96G27 269 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 ZNF354BQ96LW1 612 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 AMDHD1Q96NU7 426 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 LMF1Q96S06 567 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 DUSP26Q9BV47 211 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 TMEM120AQ9BXJ8 343 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 BHLHE41Q9C0J9 482 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 ADNPQ9H2P0 1102 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 RABEP2Q9H5N1 569 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 ACSS1Q9NUB1 689 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 GPR83Q9NYM4 423 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 STMN3Q9NZ72 180 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 ZIM2Q9NZV7 527 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 KLHL14Q9P2G3 628 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 PCDHGB4Q9UN71 923 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 LHX6Q9UPM6 363 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 ERVK-19Q9WJR5 959 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 CFL2Q9Y281 166 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 PCDHGB7Q9Y5F8 929 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 PCDHGA9Q9Y5G4 932 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 FER1L5A0AVI2 2057 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 TRBV11-1A0A0K0K1C0 115 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 A0A1W2PS29 197 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 OR6C76A6NM76 312 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 ERVH48-1M5A8F1 160 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 ANKRD28O15084 1053 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 DNAJB5O75953 348 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 ITGAMP11215 1152 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 GPC1P35052 558 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 KIR3DL1P43629 444 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 SEC24CP53992 1094 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 NME5P56597 212 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 FUT7Q11130 342 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 KCNAB2Q13303 367 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 MLC1Q15049 377 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 PRICKLE4Q2TBC4 344 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 LINC00303Q3SY05 128 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 CRB2Q5IJ48 1285 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 ABHD17BQ5VST6 288 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 HLA-DQA1Q5Y7H0 255 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 H3F3CQ6NXT2 135 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 FAM111BQ6SJ93 734 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 ISLR2Q6UXK2 745 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 RNF111Q6ZNA4 994 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 CAMKMTQ7Z624 323 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 RPS19BP1Q86WX3 136 aaKnown RBP11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 VWA5B2Q8N398 1253 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 APCDD1LQ8NCL9 501 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 ADCY4Q8NFM4 1077 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 FDCSPQ8NFU4 85 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 OR9A2Q8NGT5 310 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 OR8K3Q8NH51 312 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 ZNF675Q8TD23 568 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 BRIX1Q8TDN6 353 aaKnown RBP11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 DOK4Q8TEW6 326 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 ZNF721Q8TF20 911 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 OR5P2Q8WZ92 322 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 TTC9Q92623 222 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 TESCQ96BS2 214 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 NUDT9Q9BW91 350 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 SEMA4CQ9C0C4 833 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 GLIPR2Q9H4G4 154 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 SDR39U1Q9NRG7 319 aaPredicted RBP11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 MRGBPQ9NV56 204 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 TMEM45AQ9NWC5 275 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 ABI3Q9P2A4 366 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 PTGFRNQ9P2B2 879 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 BCAP29Q9UHQ4 241 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 TUBD1Q9UJT1 453 aa11.09□□□□□ -0.63
SPTLC1-202ENST00000337841 PRSS51A0A1B0GVH4 220 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 C2orf72A6NCS6 295 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 PLOD2O00469 737 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 CDK2AP1O14519 115 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 CFLARO15519 480 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 PLOD3O60568 738 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 IGKV3-11P04433 115 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 IL6P05231 212 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 CELA2AP08217 269 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 FRKP42685 505 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 ATP4BP51164 291 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 DUSP2Q05923 314 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 MGAT2Q10469 447 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 SF3A3Q12874 501 aaKnown RBP eCLIP11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 RAPSNQ13702 412 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 MEP1AQ16819 746 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 TRMT12Q53H54 448 aaKnown RBP11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 ZNF385BQ569K4 471 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 ZNF628Q5EBL2 1059 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 SLC29A4Q7RTT9 530 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 ZNF551Q7Z340 670 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 HPS6Q86YV9 775 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 LGI4Q8N135 537 aa11.08□□□□□ -0.64
SPTLC1-202ENST00000337841 KIF2BQ8N4N8 673 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms