RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 SLC7A13Q8TCU3 470 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 MS4A6EQ96DS6 147 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 SLC35G5Q96KT7 338 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 Q96MT0 163 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 GPA33Q99795 319 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 C6orf62Q9GZU0 229 aaPredicted RBP8.36□□□□□ -1.07
SNCA-201ENST00000336904 MKLN1Q9UL63 735 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 MRPS2Q9Y399 296 aaKnown RBP8.36□□□□□ -1.07
SNCA-201ENST00000336904 CENPVL1A0A0U1RR11 272 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 PRSS38A1L453 326 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 TMEM247A6NEH6 219 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 P2RX6O15547 441 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 PRKNO60260 465 aaPredicted RBP8.36□□□□□ -1.07
SNCA-201ENST00000336904 RPN2P04844 631 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 ZNF888P0CJ79 500 aaPredicted RBP8.36□□□□□ -1.07
SNCA-201ENST00000336904 TTKP33981 857 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 TRIM23P36406 574 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 SOX3P41225 446 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 PXNP49023 591 aaPredicted RBP8.36□□□□□ -1.07
SNCA-201ENST00000336904 ST13P50502 369 aaKnown RBP8.36□□□□□ -1.07
SNCA-201ENST00000336904 FUT5Q11128 374 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 GRSF1Q12849 480 aaKnown RBP eCLIP8.36□□□□□ -1.07
SNCA-201ENST00000336904 FADDQ13158 208 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 TIGD6Q17RP2 521 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 PROX2Q3B8N5 592 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 ZC3H12BQ5HYM0 836 aaKnown RBP8.36□□□□□ -1.07
SNCA-201ENST00000336904 ZC3H14Q6PJT7 736 aaKnown RBP8.36□□□□□ -1.07
SNCA-201ENST00000336904 B3GLCTQ6Y288 498 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 PTCHD4Q6ZW05 846 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 FAM160A2Q8N612 972 aaPredicted RBP8.36□□□□□ -1.07
SNCA-201ENST00000336904 OR5T3Q8NGG3 340 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 RPLP0P6Q8NHW5 317 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 FNDC8Q8TC99 324 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 SLC9A6Q92581 669 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 RAB7BQ96AH8 199 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 SIPA1Q96FS4 1042 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 TUBA1CQ9BQE3 449 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 WASH6PQ9NQA3 447 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 SLC35C2Q9NQQ7 365 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 C2orf42Q9NWW7 574 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 CNIH4Q9P003 139 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 CLEC1BQ9P126 229 aa8.36□□□□□ -1.07
SNCA-201ENST00000336904 NDRG2Q9UN36 371 aaKnown RBP8.36□□□□□ -1.07
SNCA-201ENST00000336904 LOC105369274A0A096LPK9 316 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 A0A0A6YYD5 115 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 LOC102723532A0A0G2JNH3 316 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 CPSF4LA6NMK7 179 aaKnown RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 EFCAB9A8MZ26 197 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 FCMRO60667 390 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 LDB3O75112 727 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 ENTPD6O75354 484 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 EPPINO95925 133 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 HNRNPCP07910 306 aaKnown RBP eCLIP8.35□□□□□ -1.07
SNCA-201ENST00000336904 INHBBP09529 407 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 TGFBR2P37173 567 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 PCBP4P57723 403 aaKnown RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 IFITM3Q01628 133 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 ZNF33BQ06732 778 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 AGERQ15109 404 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 PRRT3Q5FWE3 981 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 IQCHQ86VS3 1027 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 OR4N4Q8N0Y3 316 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 DNAJC22Q8N4W6 341 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 SUN3Q8TAQ9 357 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 FBLIM1Q8WUP2 373 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 RLN3Q8WXF3 142 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 OR5P2Q8WZ92 322 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 OTULINQ96BN8 352 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 NEURL3Q96EH8 262 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 CENPOQ9BU64 300 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 TMEM38AQ9H6F2 299 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 ZNF624Q9P2J8 865 aaPredicted RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 CAB39Q9Y376 341 aaPredicted RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 CACNB4O00305 520 aaPredicted RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 ZSCAN9O15535 394 aaPredicted RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 HCRTR1O43613 425 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 ERGP11308 486 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 TYRP1P17643 537 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 FUT1P19526 365 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 HIST1H1TP22492 207 aaPredicted RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 ELAVL4P26378 380 aaKnown RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 CALRP27797 417 aaKnown RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 PKLRP30613 574 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 NTSR1P30989 418 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 MAPK9P45984 424 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 PCDH1Q08174 1060 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 RPA4Q13156 261 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 TOP3AQ13472 1001 aaPredicted RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 SLC9A5Q14940 896 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 CRB2Q5IJ48 1285 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 FRMPD2BQ6IN97 320 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 FAM111BQ6SJ93 734 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 TCEANCQ8N8B7 351 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 RELTQ969Z4 430 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 CXorf40BQ96DE9 158 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 LGALS12Q96DT0 336 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 ZBED6CLQ96FA7 236 aaPredicted RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 SMAD5Q99717 465 aaKnown RBP8.35□□□□□ -1.07
SNCA-201ENST00000336904 DSN1Q9H410 356 aa8.35□□□□□ -1.07
SNCA-201ENST00000336904 EGLN3Q9H6Z9 239 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms