RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 PCCBP05166 539 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 ITGAMP11215 1152 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 CFL1P23528 166 aaKnown RBP13.19□□□□□ -0.3
SF1-202ENST00000334944 DDX6P26196 483 aaKnown RBP eCLIP13.19□□□□□ -0.32e-7■■□□□ 12
SF1-202ENST00000334944 EVI2BP34910 448 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 CNTN1Q12860 1018 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 ZNF234Q14588 700 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 FAM78AQ5JUQ0 283 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 DNAJB8Q8NHS0 232 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 NFKBIDQ8NI38 313 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 SIPA1Q96FS4 1042 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 SAGE1Q9NXZ1 904 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 RHCGQ9UBD6 479 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 ZMAT5Q9UDW3 170 aaKnown RBP13.19□□□□□ -0.3
SF1-202ENST00000334944 TSPAN11A1L157 253 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 LINC01553A4QN01 128 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 SUV39H1O43463 412 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 UGDHO60701 494 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 KCNJ13O60928 360 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 RPS19P39019 145 aaKnown RBP13.18□□□□□ -0.3
SF1-202ENST00000334944 ALDH9A1P49189 494 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 SMSP52788 366 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 KCNC3Q14003 757 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 MFSD13AQ14CX5 517 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 ARSKQ6UWY0 536 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 CBLL1Q75N03 491 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 RNF130Q86XS8 419 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 SYNPOQ8N3V7 929 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 VPS37AQ8NEZ2 397 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 OR52E4Q8NGH9 312 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 ENKURQ8TC29 256 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 FCRL1Q96LA6 429 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 CCDC32Q9BV29 185 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 GALNT9Q9HCQ5 603 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 DEC1Q9P2X7 70 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 WWP2O00308 870 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 ZNF197O14709 1029 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 EPHX1P07099 455 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 KCNJ10P78508 379 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 TMEM240Q5SV17 173 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 EIF3MQ7L2H7 374 aaKnown RBP13.18□□□□□ -0.3
SF1-202ENST00000334944 GPR65Q8IYL9 337 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 STX19Q8N4C7 294 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 CELF5Q8N6W0 485 aaKnown RBP13.18□□□□□ -0.3
SF1-202ENST00000334944 OR6C4Q8NGE1 309 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 OR9A1PQ8NGU1 263 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 AKAP1Q92667 903 aaKnown RBP eCLIP13.18□□□□□ -0.35e-7■□□□□ 10.6
SF1-202ENST00000334944 GGHQ92820 318 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 SLC22A4Q9H015 551 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 CCNB1IP1Q9NPC3 277 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 DMRT3Q9NQL9 472 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 CCDC59Q9P031 241 aaKnown RBP13.18□□□□□ -0.3
SF1-202ENST00000334944 RPS6KA6Q9UK32 745 aa13.18□□□□□ -0.3
SF1-202ENST00000334944 TEX51A0A1B0GUA7 166 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 WASHC1A8K0Z3 465 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 TMEM229AB2RXF0 380 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 KLHL18O94889 574 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 IL3P08700 152 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 ADRA2AP08913 450 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 MSL3P1P0C860 447 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 C1GALT1C1LP0DN25 315 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 DNAJA1P31689 397 aaKnown RBP13.17□□□□□ -0.3
SF1-202ENST00000334944 CCT3P49368 545 aaKnown RBP13.17□□□□□ -0.3
SF1-202ENST00000334944 ZNF763Q0D2J5 394 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 GALEQ14376 348 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 GANABQ14697 944 aaKnown RBP13.17□□□□□ -0.3
SF1-202ENST00000334944 QPRTQ15274 297 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 CCDC85BQ15834 202 aaPredicted RBP13.17□□□□□ -0.3
SF1-202ENST00000334944 SLC5A12Q1EHB4 618 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 KLHL17Q6TDP4 642 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 WASH2PQ6VEQ5 465 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 CFAP77Q6ZQR2 320 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 ZNF767PQ75MW2 155 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 TSEN54Q7Z6J9 526 aaKnown RBP13.17□□□□□ -0.3
SF1-202ENST00000334944 HMGN2P46Q86SG4 172 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 VWA5B2Q8N398 1253 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 PPCDCQ96CD2 204 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 FAM129BQ96TA1 746 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 MACROD1Q9BQ69 325 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 DYRK4Q9NR20 520 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 CUEDC1Q9NWM3 386 aaPredicted RBP13.17□□□□□ -0.3
SF1-202ENST00000334944 MARK1Q9P0L2 795 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 TAC3Q9UHF0 121 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 OR1A2Q9Y585 309 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 GPX5O75715 221 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 SERPINI2O75830 405 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 ADH1CP00326 375 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 PRNPP04156 253 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 SERPIND1P05546 499 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 TIE1P35590 1138 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 CHI3L1P36222 383 aaPredicted RBP13.17□□□□□ -0.3
SF1-202ENST00000334944 PRIM2P49643 509 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 KDM4DQ6B0I6 523 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 PLCZ1Q86YW0 608 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 SLC5A11Q8WWX8 675 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 UCN3Q969E3 161 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 REPS1Q96D71 796 aa13.17□□□□□ -0.3
SF1-202ENST00000334944 OTUB1Q96FW1 271 aaPredicted RBP13.17□□□□□ -0.3
SF1-202ENST00000334944 MS4A7Q9GZW8 240 aaPredicted RBP13.17□□□□□ -0.3
SF1-202ENST00000334944 NLKQ9UBE8 527 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms