RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ANKHQ9HCJ1 492 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 PDE7BQ9NP56 450 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 TMEM138Q9NPI0 162 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 YKT6O15498 198 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 NDUFS4O43181 175 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 NME6O75414 186 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-201ENST00000334136 C1GALT1C1LP0DN25 315 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 CLCN2P51788 898 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 NHSL2Q5HYW2 709 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.23□□□□□ -0.61
HDAC6-201ENST00000334136 HLA-DQA1Q5Y7H0 255 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 BICRALQ6AI39 1079 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 RASGRP3Q8IV61 690 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 PRSS58Q8IYP2 241 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 OR52E1Q8NGJ3 308 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 TSPEARQ8WU66 669 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 ASB11Q8WXH4 323 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 RDH12Q96NR8 316 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 ZNF607Q96SK3 696 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 STRADBQ9C0K7 418 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 DNAJC27Q9NZQ0 273 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 CCDC59Q9P031 241 aaKnown RBP11.23□□□□□ -0.61
HDAC6-201ENST00000334136 FBXW2Q9UKT8 454 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 MKLN1Q9UL63 735 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 ERVK-11Q9UQG0 969 aa11.23□□□□□ -0.61
HDAC6-201ENST00000334136 SPTBN2O15020 2390 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 FAM172BPA6NC97 362 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 TMX2-CTNND1H3BSU7 103 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 EEDO75530 441 aaKnown RBP11.22□□□□□ -0.61
HDAC6-201ENST00000334136 JMJD7P0C870 316 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 PRPS1L1P21108 318 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 HRH2P25021 359 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 ASMTP46597 345 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 MAZP56270 477 aaKnown RBP11.22□□□□□ -0.61
HDAC6-201ENST00000334136 SMIM11AP58511 58 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 HSPB3Q12988 150 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 ALG11Q2TAA5 492 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 SH2D5Q6ZV89 423 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 ABCA7Q8IZY2 2146 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 ZNF675Q8TD23 568 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 RPL3LQ92901 407 aaKnown RBP11.22□□□□□ -0.61
HDAC6-201ENST00000334136 EXOSC8Q96B26 276 aaKnown RBP11.22□□□□□ -0.61
HDAC6-201ENST00000334136 NDC1Q9BTX1 674 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 PCDHGA2Q9Y5H1 932 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 CLCA3PQ9Y6N3 262 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 PCNTO95613 3336 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 PATJQ8NI35 1801 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 ERI3O43414 337 aaKnown RBP11.22□□□□□ -0.61
HDAC6-201ENST00000334136 OR5F1O95221 314 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 DCTP40126 519 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 CLCN7P51798 805 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 NR0B2Q15466 257 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 KCNJ8Q15842 424 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 BHLHB9Q6PI77 547 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 Q6ZNX1 250 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 FAM92BQ6ZTR7 304 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 SLC22A15Q8IZD6 547 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 ITPKCQ96DU7 683 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 COL21A1Q96P44 957 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 KRCC1Q9NPI7 259 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-201ENST00000334136 POT1Q9NUX5 634 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 VAPAQ9P0L0 249 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 NFKBIL1Q9UBC1 381 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-201ENST00000334136 VPS29Q9UBQ0 182 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 CACNA1IQ9P0X4 2223 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 CPSF4LA6NMK7 179 aaKnown RBP11.22□□□□□ -0.61
HDAC6-201ENST00000334136 I3L521 148 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 ZNF701M0R085 212 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-201ENST00000334136 CLDN4O14493 209 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 ORC5O43913 435 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 SLC2A2P11168 524 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-201ENST00000334136 AVPR1BP47901 424 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 FBXW4P57775 412 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 CMTM7Q96FZ5 175 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 PDLIM5Q96HC4 596 aaKnown RBP11.22□□□□□ -0.61
HDAC6-201ENST00000334136 FCRL4Q96PJ5 515 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 ELF4Q99607 663 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-201ENST00000334136 ASPNQ9BXN1 380 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 TEX101Q9BY14 249 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 SLC29A3Q9BZD2 475 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 TAS2R9Q9NYW1 312 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 ZNF232Q9UNY5 417 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 RUVBL1Q9Y265 456 aaKnown RBP11.22□□□□□ -0.61
HDAC6-201ENST00000334136 ENTPD2Q9Y5L3 495 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 ZNF780BQ9Y6R6 833 aa11.22□□□□□ -0.61
HDAC6-201ENST00000334136 C1orf105O95561 183 aa11.21□□□□□ -0.61
HDAC6-201ENST00000334136 BMP7P18075 431 aa11.21□□□□□ -0.61
HDAC6-201ENST00000334136 CD247P20963 164 aa11.21□□□□□ -0.61
HDAC6-201ENST00000334136 PTX3P26022 381 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-201ENST00000334136 TAS2R38P59533 333 aa11.21□□□□□ -0.61
HDAC6-201ENST00000334136 TAS2R41P59536 307 aa11.21□□□□□ -0.61
HDAC6-201ENST00000334136 E2F2Q14209 437 aa11.21□□□□□ -0.61
HDAC6-201ENST00000334136 GAB4Q2WGN9 574 aa11.21□□□□□ -0.61
HDAC6-201ENST00000334136 SDR16C5Q8N3Y7 309 aa11.21□□□□□ -0.61
HDAC6-201ENST00000334136 C1orf52Q8N6N3 182 aaKnown RBP11.21□□□□□ -0.61
HDAC6-201ENST00000334136 P2RY12Q9H244 342 aa11.21□□□□□ -0.61
HDAC6-201ENST00000334136 MS4A12Q9NXJ0 267 aa11.21□□□□□ -0.61
HDAC6-201ENST00000334136 POU2F3Q9UKI9 436 aa11.21□□□□□ -0.61
HDAC6-201ENST00000334136 MANBAO00462 879 aa11.21□□□□□ -0.61
HDAC6-201ENST00000334136 CEACAM5P06731 702 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms