RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 TMEM175Q9BSA9 504 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 DPH7Q9BTV6 452 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 ACTR6Q9GZN1 396 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 RXFP3Q9NSD7 469 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 EEF1E1-BLOC1S5C9J1V9 151 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 LCKP06239 509 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 ZNF81P51508 661 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 CRISP1P54107 249 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 EEF1A2Q05639 463 aaKnown RBP10.11□□□□□ -0.79
CLN8-201ENST00000331222 KHDC1LQ5JSQ8 128 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 ABHD17BQ5VST6 288 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 PLD6Q8N2A8 252 aaKnown RBP10.11□□□□□ -0.79
CLN8-201ENST00000331222 NAT8LQ8N9F0 302 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 OR51T1Q8NGJ9 327 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 EXTL2Q9UBQ6 330 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 SCP2D1Q9UJQ7 156 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 IFNA7P01567 189 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 GSTM2P28161 218 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 SHMT2P34897 504 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 POLR2HP52434 150 aaKnown RBP10.11□□□□□ -0.79
CLN8-201ENST00000331222 HSD11B2P80365 405 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 S100A12P80511 92 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 GRHL2Q6ISB3 625 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 IL1F10Q8WWZ1 152 aa10.11□□□□□ -0.79
CLN8-201ENST00000331222 POP5Q969H6 163 aaKnown RBP10.11□□□□□ -0.79
CLN8-201ENST00000331222 NOCTQ9UK39 431 aaKnown RBP10.11□□□□□ -0.79
CLN8-201ENST00000331222 CDC14CA4D256 554 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 CRELD2Q6UXH1 353 aaPredicted RBP10.1□□□□□ -0.79
CLN8-201ENST00000331222 FAM83CQ9BQN1 747 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 REEP4Q9H6H4 257 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 RPF2Q9H7B2 306 aaKnown RBP10.1□□□□□ -0.79
CLN8-201ENST00000331222 FMN2Q9NZ56 1722 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 SGK494L7N484 410 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 ZNF888P0CJ79 500 aaPredicted RBP10.1□□□□□ -0.79
CLN8-201ENST00000331222 PRSS56P0CW18 603 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 EEF1A1P68104 462 aaKnown RBP10.1□□□□□ -0.79
CLN8-201ENST00000331222 GINS1Q14691 196 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 MSS51Q4VC12 460 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 OR56A3Q8NH54 315 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 NKD2Q969F2 451 aaPredicted RBP10.1□□□□□ -0.79
CLN8-201ENST00000331222 BIRC7Q96CA5 298 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 LRCH3Q96II8 777 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 SECISBP2Q96T21 854 aaKnown RBP10.1□□□□□ -0.79
CLN8-201ENST00000331222 C7orf50Q9BRJ6 194 aaKnown RBP10.1□□□□□ -0.79
CLN8-201ENST00000331222 HDHD5Q9BXW7 423 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 SYNPO2LQ9H987 977 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 SFXN1Q9H9B4 322 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 SERTAD4Q9NUC0 356 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 SLC39A1Q9NY26 324 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 IGLV3-22A0A075B6J6 115 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 NPIPA5A0A0B4J1W7 369 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 OR6C6A6NF89 314 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 UNC119BA6NIH7 251 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 NPIPA7E9PJI5 369 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 ANKRD28O15084 1053 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 FOXD2O60548 495 aaPredicted RBP10.1□□□□□ -0.79
CLN8-201ENST00000331222 NPIPA8P0DM63 369 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 UNGP13051 313 aaPredicted RBP10.1□□□□□ -0.79
CLN8-201ENST00000331222 IL32P24001 234 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 GABRR1P24046 479 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 PRDX6P30041 224 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 RIDAP52758 137 aaKnown RBP10.1□□□□□ -0.79
CLN8-201ENST00000331222 HERC3Q15034 1050 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 CDKN3Q16667 212 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 OR52W1Q6IF63 320 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 PGM2L1Q6PCE3 622 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 ASRGL1Q7L266 308 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 RAD9AQ99638 391 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 HCFC1R1Q9NWW0 138 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 COPZ2Q9P299 210 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 DLX3O60479 287 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 IFNA5P01569 189 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 LCATP04180 440 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 GSTM3P21266 225 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 S100PP25815 95 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 RORAP35398 523 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 APLNRP35414 380 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 FXNQ16595 210 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 TBRG1Q3YBR2 411 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 LIN52Q52LA3 116 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 CDHR3Q6ZTQ4 885 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 ZNF610Q8N9Z0 462 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 NEIL3Q8TAT5 605 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 CICQ96RK0 1608 aaPredicted RBP10.1□□□□□ -0.79
CLN8-201ENST00000331222 CACNA1SQ13698 1873 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 A0A0U1RQF3 1178 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 FLRT2O43155 660 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 RP2O75695 350 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 NXPH3O95157 252 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 THEGLP0DJG4 465 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 RPS3P23396 243 aaKnown RBP eCLIP10.1□□□□□ -0.79
CLN8-201ENST00000331222 PTAFRP25105 342 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 ACRV1P26436 265 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 EIF5AP63241 154 aaKnown RBP10.1□□□□□ -0.79
CLN8-201ENST00000331222 TMEM44Q2T9K0 475 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 FAM214AQ32MH5 1076 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 MEX3BQ6ZN04 569 aaKnown RBP10.1□□□□□ -0.79
CLN8-201ENST00000331222 ANKK1Q8NFD2 765 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 OR4K13Q8NH42 304 aa10.1□□□□□ -0.79
CLN8-201ENST00000331222 FAM3CQ92520 227 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms