RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 SECISBP2Q96T21 854 aaKnown RBP12.51□□□□□ -0.41
GTF3C6-201ENST00000329970 ZNF703Q9H7S9 590 aaPredicted RBP12.51□□□□□ -0.41
GTF3C6-201ENST00000329970 PROK2Q9HC23 129 aa12.51□□□□□ -0.41
GTF3C6-201ENST00000329970 ACKR4Q9NPB9 350 aa12.51□□□□□ -0.41
GTF3C6-201ENST00000329970 TEX10Q9NXF1 929 aaPredicted RBP12.51□□□□□ -0.41
GTF3C6-201ENST00000329970 CNOT11Q9UKZ1 510 aaKnown RBP12.51□□□□□ -0.41
GTF3C6-201ENST00000329970 BOKQ9UMX3 212 aaPredicted RBP12.51□□□□□ -0.41
GTF3C6-201ENST00000329970 RNF6Q9Y252 685 aa12.51□□□□□ -0.41
GTF3C6-201ENST00000329970 LIPGQ9Y5X9 500 aa12.51□□□□□ -0.41
GTF3C6-201ENST00000329970 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.51□□□□□ -0.41
GTF3C6-201ENST00000329970 CCDC168Q8NDH2 2452 aa12.51□□□□□ -0.41
GTF3C6-201ENST00000329970 CAPN14A8MX76 684 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 TRIM49D1C9J1S8 452 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 NPIPA2E9PIF3 369 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 NPIPA3F8WFD2 350 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 KIF2AO00139 706 aaPredicted RBP12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 WDR1O75083 606 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 GUCY1B2O75343 617 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 SNRPAP09012 282 aaKnown RBP12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 HOXD4P09016 255 aaPredicted RBP12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 SBK3P0C264 359 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 CAPN3P20807 821 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 ACVR2AP27037 513 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 PIGAP37287 484 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 NR0B1P51843 470 aaKnown RBP12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 TFF3Q07654 80 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 LGSNQ5TDP6 509 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 TTC19Q6DKK2 380 aaPredicted RBP12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 MILR1Q7Z6M3 343 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 GALNT12Q8IXK2 581 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 TAGAPQ8N103 731 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 ZNF615Q8N8J6 731 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 OR7G1Q8NGA0 311 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 OR4F6Q8NGB9 312 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 OR4K14Q8NGD5 310 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 IFT81Q8WYA0 676 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 MTBPQ96DY7 904 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 NSUN5Q96P11 429 aaKnown RBP12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 ELOVL6Q9H5J4 265 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 ZFP64Q9NPA5 681 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 PNPLA3Q9NST1 481 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 TRPS1Q9UHF7 1281 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 SNX6Q9UNH7 406 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 POLQO75417 2590 aa12.5□□□□□ -0.41
GTF3C6-201ENST00000329970 TRGV5A0A0B4J1U4 118 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 C1orf226A1L170 272 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 LRRC3CA6NJW4 275 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 GLOD5A6NK44 160 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 WASHC1A8K0Z3 465 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 A8MT66 165 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 FOXO6A8MYZ6 492 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 POC1B-GALNT4F8VUJ3 575 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 G3V3Y1 287 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 PGRMC2O15173 223 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 SNRPB2P08579 225 aaKnown RBP12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 HSD3B1P14060 373 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 CPMP14384 443 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 GABRA1P14867 456 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 HSD3B2P26439 372 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 ARL1P40616 181 aaPredicted RBP12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 MAN2A2P49641 1150 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 TMED10P49755 219 aaKnown RBP12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 NUP107P57740 925 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 TRA2BP62995 288 aaKnown RBP12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 KCNJ2P63252 427 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 RPS6KA2Q15349 733 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 TMEM81Q6P7N7 255 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 RPRMLQ8N4K4 120 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 OR5M3Q8NGP4 307 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 ADIPOR1Q96A54 375 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 NTNG2Q96CW9 530 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 GAL3ST4Q96RP7 486 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 TTYH2Q9BSA4 534 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 MRPL1Q9BYD6 325 aaKnown RBP12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 SEMA4BQ9NPR2 832 aaPredicted RBP12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 NMRK1Q9NWW6 199 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 FETUBQ9UGM5 382 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 CES1P1Q9UKY3 287 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 PCDHA9Q9Y5H5 950 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 FAM215AQ9Y5M1 114 aa12.49□□□□□ -0.41
GTF3C6-201ENST00000329970 C2orf92A0A1B0GVN3 265 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 EXOC1LA0A1B0GW35 172 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 GOLGA6L10A6NI86 522 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 FAM47E-STBD1D6RA91 191 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 TP53I11O14683 189 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 CDH16O75309 829 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 TRIM3O75382 744 aaPredicted RBP12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 TOXO94900 526 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 GBAP04062 536 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 ATP1B1P05026 303 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 KLK1P06870 262 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 CELA3AP09093 270 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 CT62P0C5K7 136 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 PORP16435 677 aaPredicted RBP12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 ENDOUP21128 410 aaKnown RBP12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 MSX1P28360 303 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 GCAP28676 217 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 SSTR4P31391 388 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 XKP51811 444 aa12.48□□□□□ -0.41
GTF3C6-201ENST00000329970 MAPK12P53778 367 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms