RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 SAMD14Q8IZD0 417 aaPredicted RBP15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 ARHGEF39Q8N4T4 335 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 ZSCAN1Q8NBB4 408 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 CATSPER1Q8NEC5 780 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 ZNF583Q96ND8 569 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 SLC7A5P2Q9GIP4 190 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 PRDM7Q9NQW5 492 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 ACSS1Q9NUB1 689 aaPredicted RBP15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 ARMC1Q9NVT9 282 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 MS4A12Q9NXJ0 267 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 SLC25A37Q9NYZ2 338 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 ELOVL7A1L3X0 281 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 C21orf140B9A014 251 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 SAP18O00422 153 aaKnown RBP15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 ATXN7O15265 892 aaPredicted RBP15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 ERI3O43414 337 aaKnown RBP15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 SH3BGRLO75368 114 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 KLF7O75840 302 aaPredicted RBP15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 KLHL18O94889 574 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 SERPIND1P05546 499 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 IL3P08700 152 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 FAM58BPP0C7Q3 252 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 IL10P22301 178 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 PSMA4P25789 261 aaKnown RBP15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 OR1D4P47884 311 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 PTDSS1P48651 473 aaKnown RBP15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 SKP1P63208 163 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 HYAL2Q12891 473 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 PRTGQ2VWP7 1150 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 TOR1AIP1Q5JTV8 583 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 MLIPQ5VWP3 458 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 MRM1Q6IN84 353 aaKnown RBP15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 FKBP9P1Q75LS8 142 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 COX15Q7KZN9 410 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 ABHD13Q7L211 337 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 VN1R4Q7Z5H5 301 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 UBE3DQ7Z6J8 389 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 CALHM3Q86XJ0 350 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 MSRB3Q8IXL7 192 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 FAM47BQ8NA70 645 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 OR5P2Q8WZ92 322 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 FAM120BQ96EK7 910 aaKnown RBP15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 ZBED6CLQ96FA7 236 aaPredicted RBP15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 REXO5Q96IC2 774 aaKnown RBP15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 C10orf90Q96M02 699 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 UBL7Q96S82 380 aaPredicted RBP15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 NDC1Q9BTX1 674 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 PCDHAC1Q9H158 963 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 COPS7BQ9H9Q2 264 aaPredicted RBP15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 NEUROD4Q9HD90 331 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 CUTCQ9NTM9 273 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 PSME2Q9UL46 239 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 EXO1Q9UQ84 846 aaKnown RBP15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 MRPS2Q9Y399 296 aaKnown RBP15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 AP4S1Q9Y587 144 aa15.46■□□□□ 0.06
PDLIM1-201ENST00000329399 COL6A6A6NMZ7 2263 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 C1orf226A1L170 272 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 ERVH48-1M5A8F1 160 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 CLIC1O00299 241 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 CASQ2O14958 399 aaPredicted RBP15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 ARPC2O15144 300 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 HNRNPRO43390 633 aaKnown RBP15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 SRPX2O60687 465 aaPredicted RBP15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 C1QL1O75973 258 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 KRT75O95678 551 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 BAG2O95816 211 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 FCGR1AP12314 374 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 IL1RNP18510 177 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 ATP5A1P25705 553 aaKnown RBP15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 FRKP42685 505 aaPredicted RBP15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 NKAIN1Q4KMZ8 207 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 LRRC74BQ6ZQY2 392 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 ZNF621Q6ZSS3 439 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 HIPK4Q8NE63 616 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 PYDC1Q8WXC3 89 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 SLC39A7Q92504 469 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 GPR87Q9BY21 358 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 YY1AP1Q9H869 796 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 CLK4Q9HAZ1 481 aaKnown RBP15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 CCM2LQ9NUG4 571 aaPredicted RBP15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 TAS2R9Q9NYW1 312 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 PHF11Q9UIL8 331 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 KCND3Q9UK17 655 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 PACSIN3Q9UKS6 424 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 TCFL5Q9UL49 500 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 MAU2Q9Y6X3 613 aa15.45■□□□□ 0.06
PDLIM1-201ENST00000329399 CROCCQ5TZA2 2017 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 A0A1W2PRB8 838 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 HYKKA2RU49 373 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 CDC14CA4D256 554 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 GSTA4O15217 222 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 PEX1O43933 1283 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 SMIM10L1P0DMW3 83 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 GGT1P19440 569 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 PLA2G16P53816 162 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 MTPNP58546 118 aa15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 RPS15P62841 145 aaKnown RBP15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 DCDP81605 110 aaKnown RBP15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 TXNL4AP83876 142 aaKnown RBP15.44■□□□□ 0.06
PDLIM1-201ENST00000329399 FADDQ13158 208 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms