RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ZNF844Q08AG5 666 aa25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 FUT7Q11130 342 aa25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 ZNF750Q32MQ0 723 aa25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 SCIMPQ6UWF3 145 aa25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 C10orf107Q8IVU9 208 aa25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 MMP21Q8N119 569 aa25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 GHDCQ8N2G8 530 aa25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 C16orf52Q8NHV5 167 aa25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 KLHL29Q96CT2 875 aa25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 APIPQ96GX9 242 aa25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 PLEKHB1Q9UF11 243 aaPredicted RBP25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 SPTAN1Q13813 2472 aaKnown RBP25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 TRIM13O60858 407 aa25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 CLPSP04118 112 aa25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 DRD2P14416 443 aa25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 SSTR4P31391 388 aa25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 TIA1P31483 386 aaKnown RBP eCLIP25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 RAE1P78406 368 aaKnown RBP25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 BTKQ06187 659 aa25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 PCLAFQ15004 111 aa25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 EBPQ15125 230 aaKnown RBP25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 IMPG1Q17R60 797 aa25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 KRT71Q3SY84 523 aa25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 SPDYAQ5MJ70 313 aa25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 GALNT18Q6P9A2 607 aa25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 BNC2Q6ZN30 1099 aaPredicted RBP25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 DND1Q8IYX4 353 aaKnown RBP25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 OR7G1Q8NGA0 311 aa25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 SACM1LQ9NTJ5 587 aa25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 DEPPQ9NTK1 212 aa25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 SIRT5Q9NXA8 310 aa25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 DLGAP4Q9Y2H0 992 aa25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 ZNF780BQ9Y6R6 833 aa25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 SPTBN1Q01082 2364 aaKnown RBP25.53■■□□□ 1.68
ATPAF1-201ENST00000329231 C2orf92A0A1B0GVN3 265 aa25.52■■□□□ 1.68
ATPAF1-201ENST00000329231 NADKO95544 446 aaPredicted RBP25.52■■□□□ 1.68
ATPAF1-201ENST00000329231 ATP1B1P05026 303 aa25.52■■□□□ 1.68
ATPAF1-201ENST00000329231 CT62P0C5K7 136 aa25.52■■□□□ 1.68
ATPAF1-201ENST00000329231 UROSP10746 265 aa25.52■■□□□ 1.68
ATPAF1-201ENST00000329231 CNR1P21554 472 aa25.52■■□□□ 1.68
ATPAF1-201ENST00000329231 FEN1P39748 380 aaKnown RBP25.52■■□□□ 1.68
ATPAF1-201ENST00000329231 RFC3P40938 356 aa25.52■■□□□ 1.68
ATPAF1-201ENST00000329231 CA7P43166 264 aa25.52■■□□□ 1.68
ATPAF1-201ENST00000329231 GSTM5P46439 218 aa25.52■■□□□ 1.68
ATPAF1-201ENST00000329231 HLA-DQA1Q5Y7H0 255 aa25.52■■□□□ 1.68
ATPAF1-201ENST00000329231 TAGAPQ8N103 731 aa25.52■■□□□ 1.68
ATPAF1-201ENST00000329231 C11orf24Q96F05 449 aaPredicted RBP25.52■■□□□ 1.68
ATPAF1-201ENST00000329231 SMC6Q96SB8 1091 aa25.52■■□□□ 1.68
ATPAF1-201ENST00000329231 TRMOQ9BU70 441 aa25.52■■□□□ 1.68
ATPAF1-201ENST00000329231 OR10A5Q9H207 317 aa25.52■■□□□ 1.68
ATPAF1-201ENST00000329231 ICE1Q9Y2F5 2266 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 A1L4Q6 167 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 P04436 131 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 IL3P08700 152 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 SERPINB3P29508 390 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 HEPACAMQ14CZ8 416 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 ZNF791Q3KP31 576 aaPredicted RBP25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 GK5Q6ZS86 529 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 TRIM46Q7Z4K8 759 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 SPPL2CQ8IUH8 684 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 VWA5B2Q8N398 1253 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 OR2M7Q8NG81 312 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 C16orf78Q8WTQ4 265 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 TP53INP1Q96A56 240 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 SPACA9Q96E40 222 aaPredicted RBP25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 FAM111AQ96PZ2 611 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 FAM173AQ9BQD7 235 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 GATA5Q9BWX5 397 aaPredicted RBP25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 SHCBP1LQ9BZQ2 653 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 RRAGDQ9NQL2 400 aaPredicted RBP25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 HEY2Q9UBP5 337 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 UTS2RQ9UKP6 389 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 ZNF835Q9Y2P0 537 aa25.51■■□□□ 1.67
ATPAF1-201ENST00000329231 ANXA4P09525 319 aaPredicted RBP25.5■■□□□ 1.67
ATPAF1-201ENST00000329231 PLGLB1Q02325 96 aa25.5■■□□□ 1.67
ATPAF1-201ENST00000329231 MAP4K2Q12851 820 aa25.5■■□□□ 1.67
ATPAF1-201ENST00000329231 PRICKLE4Q2TBC4 344 aa25.5■■□□□ 1.67
ATPAF1-201ENST00000329231 LYPD8Q6UX82 237 aa25.5■■□□□ 1.67
ATPAF1-201ENST00000329231 SAMD14Q8IZD0 417 aaPredicted RBP25.5■■□□□ 1.67
ATPAF1-201ENST00000329231 LRRC25Q8N386 305 aaPredicted RBP25.5■■□□□ 1.67
ATPAF1-201ENST00000329231 ZNF615Q8N8J6 731 aa25.5■■□□□ 1.67
ATPAF1-201ENST00000329231 BRINP2Q9C0B6 783 aa25.5■■□□□ 1.67
ATPAF1-201ENST00000329231 SUCOQ9UBS9 1254 aaKnown RBP25.5■■□□□ 1.67
ATPAF1-201ENST00000329231 DOPEY1Q5JWR5 2465 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 ACOT7O00154 380 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 CCL21O00585 134 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 HS6ST1O60243 411 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 SPAG7O75391 227 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 FBXO45P0C2W1 286 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 SLC22A10Q63ZE4 541 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 MTFR2Q6P444 385 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 Q6ZPB1 254 aaPredicted RBP25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 RGS9BPQ6ZS82 235 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 FAM47EQ6ZV65 393 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 CROCCP2Q86T23 111 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 HOMEZQ8IX15 550 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 ZNF441Q8N8Z8 693 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 CNRIP1Q96F85 164 aaPredicted RBP25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 ZNF681Q96N22 645 aa25.49■■□□□ 1.67
ATPAF1-201ENST00000329231 ZIM3Q96PE6 472 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms