RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 SNAPC1Q16533 368 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 TJAP1Q5JTD0 557 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 UNC5DQ6UXZ4 953 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 DNAJC5GQ8N7S2 189 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 WDR48Q8TAF3 677 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 SLC7A13Q8TCU3 470 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 CREB3L1Q96BA8 519 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 ALG14Q96F25 216 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 KCNJ15Q99712 375 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 SYT17Q9BSW7 474 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 TMED9Q9BVK6 235 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 POLDIP3Q9BY77 421 aaKnown RBP16.96■□□□□ 0.31
PRKCB-202ENST00000321728 MED28Q9H204 178 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 TBC1D17Q9HA65 648 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 MGAT4AQ9UM21 535 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 NCKAP1Q9Y2A7 1128 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 HELZP42694 1942 aaKnown RBP16.96■□□□□ 0.31
PRKCB-202ENST00000321728 IGSF6O95976 241 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 GABRA5P31644 462 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 MAPK8P45983 427 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 AGFG1P52594 562 aaKnown RBP16.96■□□□□ 0.31
PRKCB-202ENST00000321728 TPBGQ13641 420 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 TRIM71Q2Q1W2 868 aaKnown RBP16.96■□□□□ 0.31
PRKCB-202ENST00000321728 C3orf38Q5JPI3 329 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 MED27Q6P2C8 311 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 TEX261Q6UWH6 196 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 ZNF782Q6ZMW2 699 aaPredicted RBP16.96■□□□□ 0.31
PRKCB-202ENST00000321728 GRAMD2AQ8IUY3 354 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 GPR32P1Q8NGA4 272 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 C16orf78Q8WTQ4 265 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 SLC38A5Q8WUX1 472 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 RNFT2Q96EX2 444 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 NLNQ9BYT8 704 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 OR51B5Q9H339 312 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 PCDH10Q9P2E7 1040 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 ZNF222Q9UK12 451 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 U3KQ87 197 aa16.96■□□□□ 0.31
PRKCB-202ENST00000321728 SLC16A8O95907 504 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 RPLP2P05387 115 aaKnown RBP16.95■□□□□ 0.3
PRKCB-202ENST00000321728 SRPRAP08240 638 aaKnown RBP16.95■□□□□ 0.3
PRKCB-202ENST00000321728 CYBAP13498 195 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 BDKRB1P46663 353 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 ZNF157P51786 506 aaPredicted RBP16.95■□□□□ 0.3
PRKCB-202ENST00000321728 SMAD3P84022 425 aaKnown RBP16.95■□□□□ 0.3
PRKCB-202ENST00000321728 CSTF1Q05048 431 aaKnown RBP16.95■□□□□ 0.3
PRKCB-202ENST00000321728 PRSS53Q2L4Q9 553 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 BICRALQ6AI39 1079 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 ACSM5Q6NUN0 579 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 ASB18Q6ZVZ8 466 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 LRRC17Q8N6Y2 441 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 ZNF680Q8NEM1 530 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.95■□□□□ 0.33e-6■■□□□ 13.5
PRKCB-202ENST00000321728 APOBEC4Q8WW27 367 aaKnown RBP16.95■□□□□ 0.3
PRKCB-202ENST00000321728 NEIL2Q969S2 332 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 SCRN2Q96FV2 425 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 ZSCAN32Q9NX65 697 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 STOML2Q9UJZ1 356 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 PLXNB3Q9ULL4 1909 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 A0A0A6YYJ9 748 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 TMEM202A6NGA9 273 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 ANKDD1BA6NHY2 528 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 ZNF197O14709 1029 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 GSTM1P09488 218 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 TAF12Q16514 161 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 BCL2L15Q5TBC7 163 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 SLC51BQ86UW2 128 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 PLA2G15Q8NCC3 412 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 SENP5Q96HI0 755 aaPredicted RBP16.95■□□□□ 0.3
PRKCB-202ENST00000321728 KLF16Q9BXK1 252 aaPredicted RBP16.95■□□□□ 0.3
PRKCB-202ENST00000321728 MVB12BQ9H7P6 319 aa16.95■□□□□ 0.3
PRKCB-202ENST00000321728 PIPSLA2A3N6 862 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 LINC00862A6NCI5 91 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 SGK494L7N484 410 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 KLK1P06870 262 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 PTGS2P35354 604 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 SOX18P35713 384 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 CD79BP40259 229 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 ADAM15Q13444 863 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 PIN1Q13526 163 aaPredicted RBP16.94■□□□□ 0.3
PRKCB-202ENST00000321728 MZT2AQ6P582 158 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 SLC30A8Q8IWU4 369 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 MMP21Q8N119 569 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 SLC9A6Q92581 669 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 RAB8BQ92930 207 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 MARVELD3Q96A59 401 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 TMEM19Q96HH6 336 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 WFDC6Q9BQY6 131 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 MIEF1Q9NQG6 463 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 ELF5Q9UKW6 265 aaPredicted RBP16.94■□□□□ 0.3
PRKCB-202ENST00000321728 CLCA2Q9UQC9 943 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 KCNE2Q9Y6J6 123 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 CHP2O43745 196 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 FGF9P31371 208 aaPredicted RBP16.94■□□□□ 0.3
PRKCB-202ENST00000321728 PREPP48147 710 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 GIPRP48546 466 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 CSNK1DP48730 415 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 RGS1Q08116 209 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 SYTL3Q4VX76 610 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 FUT10Q6P4F1 479 aa16.94■□□□□ 0.3
PRKCB-202ENST00000321728 LHFPL3Q86UP9 236 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms