RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 OR10G3Q8NGC4 313 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 FAM222BQ8WU58 562 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 PPWD1Q96BP3 646 aaKnown RBP13.07□□□□□ -0.32
RPP40-201ENST00000319533 SH3GL2Q99962 352 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 GPATCH1Q9BRR8 931 aaKnown RBP13.07□□□□□ -0.32
RPP40-201ENST00000319533 PELOQ9BRX2 385 aaKnown RBP13.07□□□□□ -0.32
RPP40-201ENST00000319533 FUT8Q9BYC5 575 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 SLC6A15Q9H2J7 730 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 CLEC4MQ9H2X3 399 aaPredicted RBP13.07□□□□□ -0.32
RPP40-201ENST00000319533 LIME1Q9H400 295 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 ALG9Q9H6U8 611 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 EXO5Q9H790 373 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 DLL4Q9NR61 685 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 SNX15Q9NRS6 342 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 NUDT4Q9NZJ9 180 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 CRIM1Q9NZV1 1036 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 NFU1Q9UMS0 254 aa13.07□□□□□ -0.32
RPP40-201ENST00000319533 A0A087WUV0 522 aaPredicted RBP13.06□□□□□ -0.32
RPP40-201ENST00000319533 OR6C76A6NM76 312 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 SYCE1LA8MT33 242 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 SUPT3HB4E1H0 165 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 K7EPI3 171 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 TRIM3O75382 744 aaPredicted RBP13.06□□□□□ -0.32
RPP40-201ENST00000319533 SUPT3HO75486 399 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 C2P06681 752 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 ALOX15P16050 662 aaPredicted RBP13.06□□□□□ -0.32
RPP40-201ENST00000319533 KLK2P20151 261 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 TYK2P29597 1187 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 TIMP3P35625 211 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 PIK3CBP42338 1070 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 SERPINB9P50453 376 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 SLC37A1P57057 533 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 VSNL1P62760 191 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 DAZAP2Q15038 168 aaPredicted RBP13.06□□□□□ -0.32
RPP40-201ENST00000319533 EBPQ15125 230 aaKnown RBP13.06□□□□□ -0.32
RPP40-201ENST00000319533 FLYWCH1Q4VC44 716 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 TBCELQ5QJ74 424 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 PRAMEF20Q5VT98 475 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 MRM1Q6IN84 353 aaKnown RBP13.06□□□□□ -0.32
RPP40-201ENST00000319533 GRHL2Q6ISB3 625 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 GSPT2Q8IYD1 628 aaKnown RBP13.06□□□□□ -0.32
RPP40-201ENST00000319533 ZNF441Q8N8Z8 693 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 NAXEQ8NCW5 288 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 SLC44A1Q8WWI5 657 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 RNASE6Q93091 150 aaKnown RBP13.06□□□□□ -0.32
RPP40-201ENST00000319533 RGMAQ96B86 450 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 MBD6Q96DN6 1003 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 ATOH8Q96SQ7 321 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 SORBS1Q9BX66 1292 aaKnown RBP13.06□□□□□ -0.32
RPP40-201ENST00000319533 ZNF717Q9BY31 904 aaPredicted RBP13.06□□□□□ -0.32
RPP40-201ENST00000319533 WWTR1Q9GZV5 400 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 OR51B5Q9H339 312 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 ALKBH4Q9NXW9 302 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 ZNF629Q9UEG4 869 aaPredicted RBP13.06□□□□□ -0.32
RPP40-201ENST00000319533 PHF11Q9UIL8 331 aa13.06□□□□□ -0.32
RPP40-201ENST00000319533 FOXD3Q9UJU5 478 aaPredicted RBP13.06□□□□□ -0.32
RPP40-201ENST00000319533 NINQ8N4C6 2090 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 A0A096LPK6 155 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 CCDC189A1A4V9 331 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 A6NNC1 897 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 SAP18O00422 153 aaKnown RBP13.05□□□□□ -0.32
RPP40-201ENST00000319533 PLPP1O14494 284 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 DVL2O14641 736 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 PROM1O43490 865 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 SH3BGRLO75368 114 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 GPR75O95800 540 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 CLPSP04118 112 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 PCNAP12004 261 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 CNTFP26441 200 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 TLX1P31314 330 aaPredicted RBP13.05□□□□□ -0.32
RPP40-201ENST00000319533 GMPRP36959 345 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 ASCL1P50553 236 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 HNRNPH2P55795 449 aaKnown RBP13.05□□□□□ -0.32
RPP40-201ENST00000319533 HERVK_113P63132 956 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 ERVK-8P63133 956 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 CRYZQ08257 329 aaKnown RBP13.05□□□□□ -0.32
RPP40-201ENST00000319533 DLG1Q12959 904 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 ACSF3Q4G176 576 aaPredicted RBP13.05□□□□□ -0.32
RPP40-201ENST00000319533 UBAP2Q5T6F2 1119 aaKnown RBP13.05□□□□□ -0.32
RPP40-201ENST00000319533 C18orf63Q68DL7 685 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 RNF111Q6ZNA4 994 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 SLC29A4Q7RTT9 530 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 HUS1BQ8NHY5 278 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 RHEBL1Q8TAI7 183 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 KCTD4Q8WVF5 259 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 NXNL1Q96CM4 212 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 NTNG2Q96CW9 530 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 RMND5BQ96G75 393 aaPredicted RBP13.05□□□□□ -0.32
RPP40-201ENST00000319533 ALPK1Q96QP1 1244 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 PAFAH2Q99487 392 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 ERVK-6Q9BXR3 956 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 PARD6BQ9BYG5 372 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 PRDM14Q9GZV8 571 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 UBQLN3Q9H347 655 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 DMRT3Q9NQL9 472 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 PSD3Q9NYI0 1048 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 OPTCQ9UBM4 332 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 EDARQ9UNE0 448 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 ERVK-19Q9WJR5 959 aa13.05□□□□□ -0.32
RPP40-201ENST00000319533 ASB4Q9Y574 426 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms