RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 GPRC5BQ9NZH0 403 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 BTNL2Q9UIR0 455 aa4.33□□□□□ -1.72
CNOT1-201ENST00000317147 TNRC6AQ8NDV7 1962 aaKnown RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 LACTBL1A8MY62 500 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 SGCEO43556 437 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 PRH1P02810 166 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 UQCRC2P22695 453 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 ELK4P28324 431 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 HOXA1P49639 335 aaPredicted RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 GZMKP49863 264 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 SUOXP51687 545 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 ARF3P61204 181 aaPredicted RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 ARF1P84077 181 aaKnown RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 ZNF763Q0D2J5 394 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 TNK1Q13470 666 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 SLC6A19Q695T7 634 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 C1orf94Q6P1W5 598 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 MED27Q6P2C8 311 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 ZNF613Q6PF04 617 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 TMEM205Q6UW68 189 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 IL34Q6ZMJ4 242 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 HSD17B13Q7Z5P4 300 aaPredicted RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 GTPBP8Q8N3Z3 284 aaPredicted RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 SLC35B4Q969S0 331 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 SAMD11Q96NU1 681 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 CD180Q99467 661 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 NEURL2Q9BR09 285 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 MED9Q9NWA0 146 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 NDUFB11Q9NX14 153 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 C14orf166Q9Y224 244 aaKnown RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 SLC27A6Q9Y2P4 619 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 FXYD6-FXYD2A0A087WZ82 144 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 HYKKA2RU49 373 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 TREHO43280 583 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 ENDOD1O94919 500 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 MOCS2O96007 188 aaPredicted RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 COL6A1P12109 1028 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 DYRK1AQ13627 763 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 BOP1Q14137 746 aaKnown RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 UAP1L1Q3KQV9 507 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 DALRD3Q5D0E6 543 aaKnown RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 KDM4DQ6B0I6 523 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 SEZ6L2Q6UXD5 910 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 SSX9Q7RTT3 188 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 GPR65Q8IYL9 337 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 HS6ST3Q8IZP7 471 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 LINC00116Q8NCU8 138 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 C1orf216Q8TAB5 229 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 SNED1Q8TER0 1413 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 PPP1R13LQ8WUF5 828 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 PCYT2Q99447 389 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 MRPL45Q9BRJ2 306 aaKnown RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 STRA6Q9BX79 667 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 C1QTNF3Q9BXJ4 246 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 HOXD1Q9GZZ0 328 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 FXYD6Q9H0Q3 95 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 ELAC1Q9H777 363 aaKnown RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 SLC17A6Q9P2U8 582 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 NLKQ9UBE8 527 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 MRPS7Q9Y2R9 242 aaKnown RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 WASHC1A8K0Z3 465 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 F5H5P2 479 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 ACOT8O14734 319 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 POP7O75817 140 aaKnown RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 HTR3BO95264 441 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 BCKDHAP12694 445 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 ITGB5P18084 799 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 S100A11P31949 105 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 RPS19P39019 145 aaKnown RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 PER3P56645 1201 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 H3F3CQ6NXT2 135 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 SMIM15Q7Z3B0 74 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 NUDT13Q86X67 352 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 RNF141Q8WVD5 230 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 COPS5Q92905 334 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 FDXACB1Q9BRP7 624 aaPredicted RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 TMEM39BQ9GZU3 492 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 SMOC2Q9H3U7 446 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 SMDT1Q9H4I9 107 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 TPT1P8Q9HAU6 139 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 ARNT2Q9HBZ2 717 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 ASB6Q9NWX5 421 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 MARCH2Q9P0N8 246 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 MGAT4CQ9UBM8 478 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 EXTL2Q9UBQ6 330 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 HEBP2Q9Y5Z4 205 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 MRPL42Q9Y6G3 142 aaKnown RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 OBSL1O75147 1896 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 FAM230AA0A1W2PPH8 454 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 A0A1W2PQ09 198 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 ACSL4O60488 711 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 FKTNO75072 461 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 C1RP00736 705 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 CFHP08603 1231 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 DCTP40126 519 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 BUD31P41223 144 aaPredicted RBP4.32□□□□□ -1.72
CNOT1-201ENST00000317147 LAPTM4AQ15012 233 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 MPPED2Q15777 294 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 PLK5Q496M5 336 aa4.32□□□□□ -1.72
CNOT1-201ENST00000317147 PXKQ7Z7A4 578 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms