RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 ABHD2P08910 425 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 NSFP46459 744 aaKnown RBP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 DNA2P51530 1060 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 CBX1P83916 185 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 TFAMQ00059 246 aaKnown RBP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 SULT2A1Q06520 285 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 IL10RBQ08334 325 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 C2orf54Q08AI8 447 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 CUL2Q13617 745 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 DNAJC21Q5F1R6 531 aaKnown RBP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 BEND6Q5SZJ8 279 aaPredicted RBP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 PDSS1Q5T2R2 415 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 LIN9Q5TKA1 542 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 C8orf74Q6P047 294 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 TTC27Q6P3X3 843 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 PRSS42Q7Z5A4 293 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 RBM23Q86U06 439 aaKnown RBP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 NT5DC3Q86UY8 548 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 ANKRD46Q86W74 232 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 OR52N5Q8NH56 324 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 CCDC26Q8TAB7 109 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 DTD2Q96FN9 168 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 PGM2Q96G03 612 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 CDKN2AIPNLQ96HQ2 116 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 ANKRD36BP1Q96IX9 119 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 GAL3ST4Q96RP7 486 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 PCDHB18PQ96TA0 734 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 RHNO1Q9BSD3 238 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 LRRC1Q9BTT6 524 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 C1QTNF4Q9BXJ3 329 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 MIS12Q9H081 205 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 ACTL8Q9H568 366 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 TFB2MQ9H5Q4 396 aaKnown RBP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 ZNF446Q9NWS9 450 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 NINJ2Q9NZG7 142 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 UVRAGQ9P2Y5 699 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 PACSIN2Q9UNF0 486 aaPredicted RBP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 ALG6Q9Y672 507 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 ZNFX1Q9P2E3 1918 aaKnown RBP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 ANKDD1BA6NHY2 528 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 PGRMC1O00264 195 aaKnown RBP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 CAPN9O14815 690 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 SLC22A2O15244 555 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 ERLIN2O94905 339 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 PIGNO95427 931 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 CXCL14O95715 111 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 ASS1P00966 412 aaKnown RBP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 TSHBP01222 138 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 CLTAP09496 248 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 IGHV4-31P0DP07 118 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 MCF2P10911 925 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 TYMPP19971 482 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 LHCGRP22888 699 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 TNFSF9P41273 254 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 IER3P46695 156 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 DVL1P1P54792 670 aaPredicted RBP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 STARD6P59095 220 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 VSNL1P62760 191 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 NOP14P78316 857 aaKnown RBP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 ARF5P84085 180 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 WASHC5Q12768 1159 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 TRAP1Q12931 704 aaKnown RBP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 HSP90B2PQ58FF3 399 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 SPOUT1Q5T280 376 aaKnown RBP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 LRRC38Q5VT99 294 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 CST9Q5W186 159 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 ZCCHC12Q6PEW1 402 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 MARK2Q7KZI7 788 aaKnown RBP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 C5orf24Q7Z6I8 188 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 ZNF410Q86VK4 478 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 CD302Q8IX05 232 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 URGCPQ8TCY9 931 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 RFT1Q96AA3 541 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 IGSF21Q96ID5 467 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 MS4A14Q96JA4 679 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 TMEM204Q9BSN7 226 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 CARD9Q9H257 536 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 ASB7Q9H672 318 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 VIPAS39Q9H9C1 493 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 MRPL47Q9HD33 250 aaKnown RBP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 LCMT1Q9UIC8 334 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.64□□□□□ -1.83
SMCO3-201ENST00000316048 Q9Y3F1 56 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 R4GN57 208 aa3.64□□□□□ -1.83
SMCO3-201ENST00000316048 NRCAMQ92823 1304 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 IGLV9-49A0A0B4J1Y8 123 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 ZNF197O14709 1029 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 MED7O43513 233 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 FAM189A1O60320 539 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 SEC22BO75396 215 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 ZNF286BP0CG31 522 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 UGT1A6P19224 532 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 SLC1A1P43005 524 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 LBX1P52954 281 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 MYL6P60660 151 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 OSTNP61366 133 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 TRA2AQ13595 282 aaKnown RBP eCLIP3.63□□□□□ -1.83
SMCO3-201ENST00000316048 MESDQ14696 234 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 CASP8Q14790 479 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms