RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 MEDAGQ5VYS4 303 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 MBOAT1Q6ZNC8 495 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 GTPBP8Q8N3Z3 284 aaPredicted RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 ABHD11Q8NFV4 315 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 GNPDA2Q8TDQ7 276 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 TMIGD2Q96BF3 282 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 TMEM41AQ96HV5 264 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 CD180Q99467 661 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 ATG5Q9H1Y0 275 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 ADAP2Q9NPF8 381 aa7.84□□□□□ -1.15
VPS41-202ENST00000310301 NUFIP1Q9UHK0 495 aaKnown RBP7.84□□□□□ -1.15
VPS41-202ENST00000310301 A0A1W2PPK0 400 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 TXNL1O43396 289 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 VEGFDO43915 354 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 ZNF254O75437 659 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 UPK1BO75841 260 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 AHSGP02765 367 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 STSP08842 583 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 FGF3P11487 239 aaPredicted RBP7.84□□□□□ -1.16
VPS41-202ENST00000310301 PTPN6P29350 595 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 GLP1RP43220 463 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 PDX1P52945 283 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 FAM78AQ5JUQ0 283 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 NANOGP8Q6NSW7 305 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 FBXL22Q6P050 247 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 TIFABQ6ZNK6 161 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 BMP8AQ7Z5Y6 402 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 CEACAM19Q7Z692 300 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 FBXL6Q8N531 539 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 OR51G2Q8NGK0 314 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 NDNFQ8TB73 568 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 OSTF1Q92882 214 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 BORCS6Q96GS4 357 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 SLC45A3Q96JT2 553 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 MGLLQ99685 303 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 MMP28Q9H239 520 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 PPA2Q9H2U2 334 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 NANOGQ9H9S0 305 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 KCNK12Q9HB15 430 aa7.84□□□□□ -1.16
VPS41-202ENST00000310301 DNMT3BQ9UBC3 853 aaKnown RBP7.84□□□□□ -1.16
VPS41-202ENST00000310301 H3BMQ9 156 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 H7C417 338 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 GOSR2O14653 212 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 TYROBPO43914 113 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 RFPL3O75679 317 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 IL32P24001 234 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 IL1R2P27930 398 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 MASP1P48740 699 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 TAS2R50P59544 299 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 GNMTQ14749 295 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 SLC35F1Q5T1Q4 408 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 SFRP4Q6FHJ7 346 aaPredicted RBP7.83□□□□□ -1.16
VPS41-202ENST00000310301 UGT2A3Q6UWM9 527 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 BAIAP2L2Q6UXY1 529 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 ZNF584Q8IVC4 421 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 VWA5B2Q8N398 1253 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 COG8Q96MW5 612 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 OR4K3Q96R72 315 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 MKRN2Q9H000 416 aaKnown RBP7.83□□□□□ -1.16
VPS41-202ENST00000310301 FBRSL1Q9HCM7 1045 aaKnown RBP7.83□□□□□ -1.16
VPS41-202ENST00000310301 PCDHGA8Q9Y5G5 932 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 MAGED1Q9Y5V3 778 aaPredicted RBP7.83□□□□□ -1.16
VPS41-202ENST00000310301 MANBAO00462 879 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 EIF1AYO14602 144 aaKnown RBP7.83□□□□□ -1.16
VPS41-202ENST00000310301 GRID2O43424 1007 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 SPDEFO95238 335 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 VNN1O95497 513 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 MYF6P23409 242 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 CAMLGP49069 296 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 SIGLEC14Q08ET2 396 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 SNTA1Q13424 505 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 SLBPQ14493 270 aaKnown RBP eCLIP7.83□□□□□ -1.16
VPS41-202ENST00000310301 SHQ1Q6PI26 577 aaKnown RBP7.83□□□□□ -1.16
VPS41-202ENST00000310301 FBXO15Q8NCQ5 510 aaPredicted RBP7.83□□□□□ -1.16
VPS41-202ENST00000310301 OR52E4Q8NGH9 312 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 ZDHHC1Q8WTX9 485 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 LCN9Q8WX39 176 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 LIN37Q96GY3 246 aaPredicted RBP7.83□□□□□ -1.16
VPS41-202ENST00000310301 PSKH2Q96QS6 385 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 PCBD2Q9H0N5 130 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 ACSL5Q9ULC5 683 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 HMX3A6NHT5 357 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 SLC1A7O00341 560 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 MBTPS2O43462 519 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 FMO6PO60774 539 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 GSRP00390 522 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 VIPR1P32241 457 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 ALDH3B1P43353 468 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 RABIFP47224 123 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 SOX2P48431 317 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 GINS1Q14691 196 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 DPYSL2Q16555 572 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 AMZ1Q400G9 498 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 MINDY4Q4G0A6 757 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 FRG2Q64ET8 278 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 ASRGL1Q7L266 308 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 DEFB119Q8N690 84 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 GLIS1Q8NBF1 620 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 NAXEQ8NCW5 288 aa7.83□□□□□ -1.16
VPS41-202ENST00000310301 CLEC4CQ8WTT0 213 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms