RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 LSM1O15116 133 aaKnown RBP18.42■□□□□ 0.54
VEGFB-201ENST00000309422 LYPLA1O75608 230 aaPredicted RBP18.42■□□□□ 0.54
VEGFB-201ENST00000309422 SLC25A12O75746 678 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 BCAS2O75934 225 aaPredicted RBP18.42■□□□□ 0.54
VEGFB-201ENST00000309422 OR2J2O76002 312 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 CRYABP02511 175 aaKnown RBP18.42■□□□□ 0.54
VEGFB-201ENST00000309422 TRHRP34981 398 aaPredicted RBP18.42■□□□□ 0.54
VEGFB-201ENST00000309422 NRG3P56975 720 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 R3HCC1LQ7Z5L2 792 aaKnown RBP18.42■□□□□ 0.54
VEGFB-201ENST00000309422 DND1Q8IYX4 353 aaKnown RBP18.42■□□□□ 0.54
VEGFB-201ENST00000309422 CISD2Q8N5K1 135 aaKnown RBP18.42■□□□□ 0.54
VEGFB-201ENST00000309422 ZNF781Q8N8C0 355 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 Q8NA96 180 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 SLC35C2Q9NQQ7 365 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 THAP1Q9NVV9 213 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 PRODH2Q9UF12 536 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 BCAP29Q9UHQ4 241 aa18.42■□□□□ 0.54
VEGFB-201ENST00000309422 KLF13Q9Y2Y9 288 aaPredicted RBP18.42■□□□□ 0.54
VEGFB-201ENST00000309422 PEX11AO75192 247 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 SLITRK5O94991 958 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 CD96P40200 585 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 TMED10P49755 219 aaKnown RBP18.41■□□□□ 0.54
VEGFB-201ENST00000309422 BST1Q10588 318 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 MAPKAPK3Q16644 382 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 TICAM1Q8IUC6 712 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 MMP21Q8N119 569 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 ARMC10Q8N2F6 343 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 OR6Y1Q8NGX8 325 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 ZFP28Q8NHY6 868 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 PPCDCQ96CD2 204 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 C11orf24Q96F05 449 aaPredicted RBP18.41■□□□□ 0.54
VEGFB-201ENST00000309422 TSSK3Q96PN8 268 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 TUBB1Q9H4B7 451 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 MANSC1Q9H8J5 431 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 KLHL1Q9NR64 748 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 HEY2Q9UBP5 337 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 ZNF223Q9UK11 482 aaPredicted RBP18.41■□□□□ 0.54
VEGFB-201ENST00000309422 CES1P1Q9UKY3 287 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 PCDHGB6Q9Y5F9 930 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 MED13Q9UHV7 2174 aa18.41■□□□□ 0.54
VEGFB-201ENST00000309422 C2orf92A0A1B0GVN3 265 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 WASHC1A8K0Z3 465 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 SLCO1B7G3V0H7 640 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 IGKV3-11P04433 115 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 HK2P52789 917 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 MPP2Q14168 576 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 MPEG1Q2M385 716 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 XKR7Q5GH72 579 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 FAM71E1Q6IPT2 247 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 SLC25A25Q6KCM7 469 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 Q6ZSR9 355 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 OR2T11Q8NH01 316 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 UCN3Q969E3 161 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 SNRNP40Q96DI7 357 aaKnown RBP18.4■□□□□ 0.54
VEGFB-201ENST00000309422 ERP27Q96DN0 273 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 PRPF18Q99633 342 aaKnown RBP18.4■□□□□ 0.54
VEGFB-201ENST00000309422 NPAS2Q99743 824 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 WWTR1Q9GZV5 400 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 OR10A5Q9H207 317 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 OLAHQ9NV23 265 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 MAPRE3Q9UPY8 281 aa18.4■□□□□ 0.54
VEGFB-201ENST00000309422 TNRC6AQ8NDV7 1962 aaKnown RBP18.39■□□□□ 0.53
VEGFB-201ENST00000309422 ATP6AP2A0A1C7CYW4 349 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 PDPK1O15530 556 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 ITM2AO43736 263 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 MAN1A2O60476 641 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 COQ9O75208 318 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 ATP6AP2O75787 350 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 PRPS2P11908 318 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 SDC1P18827 310 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 SSTR4P31391 388 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 GPC1P35052 558 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 NCBP2P52298 156 aaKnown RBP eCLIP18.39■□□□□ 0.53
VEGFB-201ENST00000309422 FOXK1P85037 733 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 UGT3A2Q3SY77 523 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 HSP90B2PQ58FF3 399 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 SPINK14Q6IE38 97 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 C9orf40Q8IXQ3 194 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 CCDC116Q8IYX3 515 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 SLC15A4Q8N697 577 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 ZNF321PQ8N8H1 164 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 LRRC8CQ8TDW0 803 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 ARL8AQ96BM9 186 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 CNRIP1Q96F85 164 aaPredicted RBP18.39■□□□□ 0.53
VEGFB-201ENST00000309422 RASL10BQ96S79 203 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 REEP4Q9H6H4 257 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 ATAD3AQ9NVI7 634 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 NOP53Q9NZM5 478 aaKnown RBP18.39■□□□□ 0.53
VEGFB-201ENST00000309422 CCL27Q9Y4X3 112 aa18.39■□□□□ 0.53
VEGFB-201ENST00000309422 TRPC5OSA6NMA1 111 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 KLRC4-KLRK1H3BQV0 150 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 WISP1O95388 367 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 SP1P08047 785 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 SLC37A1P57057 533 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 WDR4P57081 412 aaKnown RBP18.38■□□□□ 0.53
VEGFB-201ENST00000309422 RPP38P78345 283 aaKnown RBP18.38■□□□□ 0.53
VEGFB-201ENST00000309422 FUT7Q11130 342 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 KIAA0040Q15053 153 aa18.38■□□□□ 0.53
VEGFB-201ENST00000309422 EBPQ15125 230 aaKnown RBP18.38■□□□□ 0.53
VEGFB-201ENST00000309422 ZNF750Q32MQ0 723 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms