RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 SH3BGRP55822 239 aaPredicted RBP4.67□□□□□ -1.66
CAST-201ENST00000309190 MRPS22P82650 360 aaKnown RBP4.67□□□□□ -1.66
CAST-201ENST00000309190 PRDX1Q06830 199 aaKnown RBP4.67□□□□□ -1.66
CAST-201ENST00000309190 GPR68Q15743 365 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 DUOXA1Q1HG43 343 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 PROX2Q3B8N5 592 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 HES3Q5TGS1 186 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 PLXDC2Q6UX71 529 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 C6orf15Q6UXA7 325 aaPredicted RBP4.67□□□□□ -1.66
CAST-201ENST00000309190 KRT78Q8N1N4 520 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 BHLHE22Q8NFJ8 381 aaPredicted RBP4.67□□□□□ -1.66
CAST-201ENST00000309190 TBC1D20Q96BZ9 403 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 NMD3Q96D46 503 aaKnown RBP4.67□□□□□ -1.66
CAST-201ENST00000309190 LYSMD1Q96S90 227 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 NDC1Q9BTX1 674 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 VCX3BQ9H321 246 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 ACTL8Q9H568 366 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 VCX3AQ9NNX9 186 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 DDX18Q9NVP1 670 aaKnown RBP4.67□□□□□ -1.66
CAST-201ENST00000309190 MID2Q9UJV3 735 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 UTS2RQ9UKP6 389 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 CDV3Q9UKY7 258 aaKnown RBP4.67□□□□□ -1.66
CAST-201ENST00000309190 MKLN1Q9UL63 735 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 CDC14AQ9UNH5 594 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 EIF3LQ9Y262 564 aaKnown RBP4.67□□□□□ -1.66
CAST-201ENST00000309190 RUVBL1Q9Y265 456 aaKnown RBP4.67□□□□□ -1.66
CAST-201ENST00000309190 SLC17A4Q9Y2C5 497 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 ZNF451Q9Y4E5 1061 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 PCDHGB6Q9Y5F9 930 aa4.67□□□□□ -1.66
CAST-201ENST00000309190 LMO7DNF2Z398 122 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 H3BSH0 61 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 DUX1O43812 170 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 SLCO2B1O94956 709 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 SYPP08247 313 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 ZNF28P17035 718 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 POU1F1P28069 291 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 CSF2RBP32927 897 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 ENTPD1P49961 510 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 NCBP2P52298 156 aaKnown RBP eCLIP4.66□□□□□ -1.66
CAST-201ENST00000309190 DOC2BQ14184 412 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 C14orf28Q4W4Y0 310 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 LYPLAL1Q5VWZ2 237 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 PWWP2BQ6NUJ5 590 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 ADAMTSL4Q6UY14 1074 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 RAB11FIP2Q7L804 512 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 TMPRSS7Q7RTY8 843 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 PARP8Q8N3A8 854 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 KIAA1958Q8N8K9 716 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 C12orf43Q96C57 262 aaKnown RBP4.66□□□□□ -1.66
CAST-201ENST00000309190 PDLIM5Q96HC4 596 aaKnown RBP4.66□□□□□ -1.66
CAST-201ENST00000309190 MBOAT4Q96T53 435 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 BARD1Q99728 777 aaKnown RBP4.66□□□□□ -1.66
CAST-201ENST00000309190 MROQ9BYG7 248 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 ALOXE3Q9BYJ1 711 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 NAA50Q9GZZ1 169 aaKnown RBP4.66□□□□□ -1.66
CAST-201ENST00000309190 RUBCNLQ9H714 662 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 SLC6A20Q9NP91 592 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 ZCCHC3Q9NUD5 404 aaKnown RBP4.66□□□□□ -1.66
CAST-201ENST00000309190 RLIMQ9NVW2 624 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 SLC39A1Q9NY26 324 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 IFT80Q9P2H3 777 aaPredicted RBP4.66□□□□□ -1.66
CAST-201ENST00000309190 PILRBQ9UKJ0 227 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 ZNF232Q9UNY5 417 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 C2orf74A8MZ97 194 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 RFXANKO14593 260 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 GNGT2O14610 69 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 RGS14O43566 566 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 TMPRSS11DO60235 418 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 SCRG1O75711 98 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 GSTM1P09488 218 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 FAM58BPP0C7Q3 252 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 NME1P15531 152 aaKnown RBP4.66□□□□□ -1.66
CAST-201ENST00000309190 ITPKBP27987 946 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 EIF2S3P41091 472 aaKnown RBP4.66□□□□□ -1.66
CAST-201ENST00000309190 CSNK1G2P78368 415 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 EEF1A2Q05639 463 aaKnown RBP4.66□□□□□ -1.66
CAST-201ENST00000309190 TRAF3Q13114 568 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 DCTN2Q13561 401 aaKnown RBP4.66□□□□□ -1.66
CAST-201ENST00000309190 CYLC2Q14093 348 aaPredicted RBP4.66□□□□□ -1.66
CAST-201ENST00000309190 GPAT3Q53EU6 434 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 PAGE3Q5JUK9 113 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 PLEKHS1Q5SXH7 462 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 NDUFAF5Q5TEU4 345 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 PRAMEF20Q5VT98 475 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 KANK2Q63ZY3 851 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 REP15Q6BDI9 236 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 NOXRED1Q6NXP6 359 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 PCYOX1LQ8NBM8 494 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 SPPL2AQ8TCT8 520 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 ATL1Q8WXF7 558 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 LRTOMTQ8WZ04 291 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 C16orf58Q96GQ5 468 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 EAF1Q96JC9 268 aaPredicted RBP4.66□□□□□ -1.66
CAST-201ENST00000309190 CCDC74BQ96LY2 380 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 LMF1Q96S06 567 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 WDR41Q9HAD4 459 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 SLC6A13Q9NSD5 602 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 TMEM45AQ9NWC5 275 aa4.66□□□□□ -1.66
CAST-201ENST00000309190 TRNAU1APQ9NX07 287 aaKnown RBP4.66□□□□□ -1.66
CAST-201ENST00000309190 CMTM6Q9NX76 183 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms