RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 POMPQ9Y244 141 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 AP3M1Q9Y2T2 418 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 TMEM131Q92545 1883 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 PRORSD1PA6NEY8 169 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 B8ZZF3 427 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 H0YGG7 62 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 RFXANKO14593 260 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 NDUFS6O75380 124 aaKnown RBP10.15□□□□□ -0.78
CASP3-201ENST00000308394 GSNP06396 782 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 TRHRP34981 398 aaPredicted RBP10.15□□□□□ -0.78
CASP3-201ENST00000308394 TAGLN2P37802 199 aaKnown RBP10.15□□□□□ -0.78
CASP3-201ENST00000308394 GFERP55789 205 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 ARF3P61204 181 aaPredicted RBP10.15□□□□□ -0.78
CASP3-201ENST00000308394 HPCAP84074 193 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 FOXM1Q08050 763 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 TGM3Q08188 693 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 DEFB110Q30KQ9 67 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 ADPRMQ3LIE5 342 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 SAMD4BQ5PRF9 694 aaKnown RBP10.15□□□□□ -0.78
CASP3-201ENST00000308394 FAM71E1Q6IPT2 247 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 ABHD17CQ6PCB6 329 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 ZNF793Q6ZN11 406 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 R3HCC1LQ7Z5L2 792 aaKnown RBP10.15□□□□□ -0.78
CASP3-201ENST00000308394 KIAA2013Q8IYS2 634 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 MMP21Q8N119 569 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 C19orf47Q8N9M1 422 aaKnown RBP10.15□□□□□ -0.78
CASP3-201ENST00000308394 CAMKVQ8NCB2 501 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 OR8J2Q8NGG1 315 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 ZCCHC10Q8TBK6 192 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 PPCDCQ96CD2 204 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 ADAD1Q96M93 576 aaKnown RBP10.15□□□□□ -0.78
CASP3-201ENST00000308394 PANX1Q96RD7 426 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 INPP5KQ9BT40 448 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 GTPBP2Q9BX10 602 aaKnown RBP10.15□□□□□ -0.78
CASP3-201ENST00000308394 SLC6A16Q9GZN6 736 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 DDX31Q9H8H2 851 aaKnown RBP10.15□□□□□ -0.78
CASP3-201ENST00000308394 COPS7BQ9H9Q2 264 aaPredicted RBP10.15□□□□□ -0.78
CASP3-201ENST00000308394 FAM60AQ9NP50 221 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 C1GALT1Q9NS00 363 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 VAPAQ9P0L0 249 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 ADAM29Q9UKF5 820 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 SLC6A14Q9UN76 642 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 EXO1Q9UQ84 846 aaKnown RBP10.15□□□□□ -0.78
CASP3-201ENST00000308394 KLK4Q9Y5K2 254 aa10.15□□□□□ -0.78
CASP3-201ENST00000308394 TP53BP1Q12888 1972 aaPredicted RBP10.14□□□□□ -0.79
CASP3-201ENST00000308394 C4orf51C9J302 202 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 TRIM38O00635 465 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 TMPRSS11DO60235 418 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 DFNA5O60443 496 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 CPSF4O95639 269 aaKnown RBP10.14□□□□□ -0.79
CASP3-201ENST00000308394 FURINP09958 794 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 ZNF888P0CJ79 500 aaPredicted RBP10.14□□□□□ -0.79
CASP3-201ENST00000308394 EPHA4P54764 986 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 VSX2P58304 361 aaPredicted RBP10.14□□□□□ -0.79
CASP3-201ENST00000308394 BTN3A2P78410 334 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 RHAGQ02094 409 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 SLAMF1Q13291 335 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 SLC9A5Q14940 896 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 HEPACAMQ14CZ8 416 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 WASHC2DQ5SRD0 308 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 USP53Q70EK8 1073 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 IFNEQ86WN2 208 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 THNSL2Q86YJ6 484 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 ACOT4Q8N9L9 421 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 TM4SF18Q96CE8 201 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 ZDHHC12Q96GR4 267 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 TBCDQ9BTW9 1192 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 KCNH6Q9H252 994 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 SMOC1Q9H4F8 434 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 PRDM7Q9NQW5 492 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 URADA6NGE7 173 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 NME4O00746 187 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 P2RX6O15547 441 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 ICAM2P13598 275 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 HIST1H1TP22492 207 aaPredicted RBP10.14□□□□□ -0.79
CASP3-201ENST00000308394 RPL3P39023 403 aaKnown RBP10.14□□□□□ -0.79
CASP3-201ENST00000308394 MTPNP58546 118 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 RNF4P78317 190 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 SLC23A3Q6PIS1 610 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 RNF44Q7L0R7 432 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 TICAM1Q8IUC6 712 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 CLECL1Q8IZS7 167 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 ZNF655Q8N720 491 aaPredicted RBP10.14□□□□□ -0.79
CASP3-201ENST00000308394 ANKFN1Q8N957 763 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 NT5CQ8TCD5 201 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 TM4SF19Q96DZ7 209 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 THUMPD3Q9BV44 507 aaKnown RBP10.14□□□□□ -0.79
CASP3-201ENST00000308394 PALMDQ9NP74 551 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 SERHLQ9NQF3 203 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 STARD5Q9NSY2 213 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 FAM120CQ9NX05 1096 aaKnown RBP10.14□□□□□ -0.79
CASP3-201ENST00000308394 SOHLH2Q9NX45 425 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 CMTM6Q9NX76 183 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 COQ3Q9NZJ6 369 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 FBXW2Q9UKT8 454 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 PCDHB14Q9Y5E9 798 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 PCDHA9Q9Y5H5 950 aa10.14□□□□□ -0.79
CASP3-201ENST00000308394 TNRC6BQ9UPQ9 1833 aaKnown RBP10.14□□□□□ -0.79
CASP3-201ENST00000308394 IGHV1OR21-1A0A087WYE8 117 aa10.13□□□□□ -0.79
CASP3-201ENST00000308394 A0A0A6YYD5 115 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms