RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 CDRT4Q8N9R6 151 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 GPR156Q8NFN8 814 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 FGGYQ96C11 551 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 MS4A4EQ96PG1 132 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 BARD1Q99728 777 aaKnown RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 POLDIP3Q9BY77 421 aaKnown RBP3.85□□□□□ -1.79
USH2A-201ENST00000307340 C19orf12Q9NSK7 152 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SNTG1Q9NSN8 517 aa3.85□□□□□ -1.79
USH2A-201ENST00000307340 SOD2P04179 222 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 PTAFRP25105 342 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 SELENOWP63302 87 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 SLC3A1Q07837 685 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 MLC1Q15049 377 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 CNN3Q15417 329 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 ESCO2Q56NI9 601 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 PLA2G15Q8NCC3 412 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 OR52N2Q8NGI0 321 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 DDX1Q92499 740 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 MSI2Q96DH6 328 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 NAA11Q9BSU3 229 aaPredicted RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 NGBQ9NPG2 151 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 FZD4Q9ULV1 537 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 FAM230AA0A1W2PPH8 454 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 CPED1A4D0V7 1026 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 ANKRD33BA6NCL7 494 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 SCAMP3O14828 347 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 HCRTR2O43614 444 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 G0S2P27469 103 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 CHIT1Q13231 466 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 SPHARQ15513 63 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 TBRG1Q3YBR2 411 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 NANOGP8Q6NSW7 305 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 CLEC20AQ6ZU45 233 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 RDH10Q8IZV5 341 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 GHDCQ8N2G8 530 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 ARL14Q8N4G2 192 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 NUS1Q96E22 293 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 CADM1Q9BY67 442 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 NANOGQ9H9S0 305 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 DCAF13Q9NV06 445 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 ADAM10O14672 748 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 CPSF4O95639 269 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 IFNA5P01569 189 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 CR2P20023 1033 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 RAB4AP20338 218 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 RPS3AP61247 264 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 TAGLNQ01995 201 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 ECH1Q13011 328 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 MSS51Q4VC12 460 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 KHDC1Q4VXA5 237 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 SPATA22Q8NHS9 363 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 LCN9Q8WX39 176 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 SCRN2Q96FV2 425 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 DGAT2Q96PD7 388 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 LGMNQ99538 433 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 DCUN1D5Q9BTE7 237 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 LDAHQ9H6V9 325 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 PARPBPQ9NWS1 579 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 RASD1Q9Y272 281 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 LOC285095A0A1B0GVY8 99 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 PIP5K1BO14986 540 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 UPK1BO75841 260 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 SDHBP21912 280 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 GP2P55259 537 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 RPS27AP62979 156 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 UBA52P62987 128 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 RHBDF2Q6PJF5 856 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 ZNF280BQ86YH2 543 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 COMMD1Q8N668 190 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 ZNF283Q8N7M2 679 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 IL12RB2Q99665 862 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 ZDHHC6Q9H6R6 413 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 ZNF222Q9UK12 451 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 HSPB11Q9Y547 144 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 FAM170BA6NMN3 283 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 EIF1BO60739 113 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 SHBGP04278 402 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 CORO1AP31146 461 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 AGTR2P50052 363 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 SLC5A8Q8N695 610 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 TERB2Q8NHR7 220 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 ZNF675Q8TD23 568 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 MAFIPQ8WZ33 124 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 TFAP2CQ92754 450 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 PHYHIPLQ96FC7 376 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 SLC35G5Q96KT7 338 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 PIGQQ9BRB3 760 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 ZFR2Q9UPR6 939 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 ZNF726A6NNF4 738 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 E5RGE8 158 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 FZD9O00144 591 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 EMC8O43402 210 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 CELF2O95319 508 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 CPSF6Q16630 551 aaKnown RBP eCLIP3.84□□□□□ -1.79
USH2A-201ENST00000307340 UPP1Q16831 310 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 TSEN15Q8WW01 171 aaKnown RBP3.84□□□□□ -1.79
USH2A-201ENST00000307340 RNF31Q96EP0 1072 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 MAP6Q96JE9 813 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 PPA2Q9H2U2 334 aa3.84□□□□□ -1.79
USH2A-201ENST00000307340 PELI2Q9HAT8 420 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms