RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 A0A1W2PQL4 384 aaPredicted RBP12.09□□□□□ -0.47
USP38-201ENST00000307017 BCAS2O75934 225 aaPredicted RBP12.09□□□□□ -0.47
USP38-201ENST00000307017 HLA-DPB1P04440 258 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 AMY2AP04746 511 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 GNSP15586 552 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 CD34P28906 385 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 DPY19L3Q6ZPD9 716 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 MYLIPQ8WY64 445 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 OSTF1Q92882 214 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 MR1Q95460 341 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 ITFG2Q969R8 447 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 BOCQ9BWV1 1114 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 NAALAD2Q9Y3Q0 740 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 C8BP07358 591 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 SFTPDP35247 375 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 FAM205BPQ63HN1 556 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 GJD3Q8N144 294 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 TSTD1Q8NFU3 115 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 SAMD11Q96NU1 681 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 ACKR4Q9NPB9 350 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 H3BML4 177 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 LEFTY1O75610 366 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 GSTT2P0CG29 244 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 ACPPP15309 386 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 OGNP20774 298 aaKnown RBP12.09□□□□□ -0.47
USP38-201ENST00000307017 PNLIPRP1P54315 467 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 TMEM115Q12893 351 aaPredicted RBP12.09□□□□□ -0.47
USP38-201ENST00000307017 PCGF3Q3KNV8 242 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 AQP12AQ8IXF9 295 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 SUN3Q8TAQ9 357 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 LGALS12Q96DT0 336 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 ARL5BQ96KC2 179 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 NECAB3Q96P71 396 aaPredicted RBP12.09□□□□□ -0.47
USP38-201ENST00000307017 FCRL5Q96RD9 977 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 BCL7BQ9BQE9 202 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 NUSAP1Q9BXS6 441 aaKnown RBP12.09□□□□□ -0.47
USP38-201ENST00000307017 RETREG1Q9H6L5 497 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 TMEM45AQ9NWC5 275 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 SCP2D1Q9UJQ7 156 aa12.09□□□□□ -0.47
USP38-201ENST00000307017 A0A1W2PP55 124 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 J3KTA2 159 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 SSX4O60224 188 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 ZIC2O95409 532 aaPredicted RBP12.08□□□□□ -0.48
USP38-201ENST00000307017 PRKACBP22694 351 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 MMP14P50281 582 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 GNMTQ14749 295 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 CES4AQ5XG92 561 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 TIGD3Q6B0B8 471 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 OR8K5Q8NH50 307 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 IRGQQ8WZA9 623 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 ZNF775Q96BV0 537 aaPredicted RBP12.08□□□□□ -0.48
USP38-201ENST00000307017 TUBB1Q9H4B7 451 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 MYH1P12882 1939 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 MYH4Q9Y623 1939 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 M0R3H8 397 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 LDOC1O95751 146 aaPredicted RBP12.08□□□□□ -0.48
USP38-201ENST00000307017 RPA2P15927 270 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 ATP5A1P25705 553 aaKnown RBP12.08□□□□□ -0.48
USP38-201ENST00000307017 CYP1B1Q16678 543 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 PGAM5Q96HS1 289 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 FAM71F1Q96KD3 344 aaPredicted RBP12.08□□□□□ -0.48
USP38-201ENST00000307017 CSNK1G3Q9Y6M4 447 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 DCDC2BA2VCK2 349 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 TRIM46Q7Z4K8 759 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 LRRC15Q8TF66 581 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 ABI3Q9P2A4 366 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 RHBDD3Q9Y3P4 386 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 MYH7BA7E2Y1 1941 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 TCRBV21S2A2A0A5A6 115 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 C2orf78A6NCI8 922 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 LYPLA2O95372 231 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 HMGN1P05114 100 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 RPLP2P05387 115 aaKnown RBP12.08□□□□□ -0.48
USP38-201ENST00000307017 SERPINA7P05543 415 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 PBX2P40425 430 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 TUBB3Q13509 450 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 PSAPL1Q6NUJ1 521 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 Q6ZVL8 140 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 BBS10Q8TAM1 723 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 DPH1Q9BZG8 443 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 OR51E2Q9H255 320 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 NELFAQ9H3P2 528 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 Q9N2J8 555 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 ETV4P43268 484 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 KCNC1P48547 511 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 GALNT1Q10472 559 aaPredicted RBP12.08□□□□□ -0.48
USP38-201ENST00000307017 PLGLAQ15195 96 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 FAM83FQ8NEG4 500 aaPredicted RBP12.08□□□□□ -0.48
USP38-201ENST00000307017 MYRFLQ96LU7 910 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 OR5B12Q96R08 314 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 GCM1Q9NP62 436 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 FTSJ1Q9UET6 329 aa12.08□□□□□ -0.48
USP38-201ENST00000307017 B8ZZF3 427 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 IMPA2O14732 288 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 RASAL1O95294 804 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 IFNGR1P15260 489 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 CCINQ13939 588 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 RNF151Q2KHN1 245 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 PIP5KL1Q5T9C9 394 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 CREB3L4Q8TEY5 395 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms