RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 TOE1Q96GM8 510 aaKnown RBP7.97□□□□□ -1.13
PCDHB1-201ENST00000306549 TM9SF3Q9HD45 589 aa7.97□□□□□ -1.13
PCDHB1-201ENST00000306549 GREB1Q4ZG55 1949 aa7.97□□□□□ -1.13
PCDHB1-201ENST00000306549 LOC102723532A0A0G2JNH3 316 aa7.97□□□□□ -1.13
PCDHB1-201ENST00000306549 TNFRSF10CO14798 259 aa7.97□□□□□ -1.13
PCDHB1-201ENST00000306549 PPM1BO75688 479 aa7.97□□□□□ -1.13
PCDHB1-201ENST00000306549 GJA4P35212 333 aa7.97□□□□□ -1.13
PCDHB1-201ENST00000306549 GGT2P36268 569 aa7.97□□□□□ -1.13
PCDHB1-201ENST00000306549 EMX2Q04743 252 aa7.97□□□□□ -1.13
PCDHB1-201ENST00000306549 SH3PXD2AQ5TCZ1 1133 aa7.97□□□□□ -1.13
PCDHB1-201ENST00000306549 ANKRD46Q86W74 232 aa7.97□□□□□ -1.13
PCDHB1-201ENST00000306549 COPS4Q9BT78 406 aa7.97□□□□□ -1.13
PCDHB1-201ENST00000306549 TIMMDC1Q9NPL8 285 aa7.97□□□□□ -1.13
PCDHB1-201ENST00000306549 PCDHB14Q9Y5E9 798 aa7.97□□□□□ -1.13
PCDHB1-201ENST00000306549 SRPX2O60687 465 aaPredicted RBP7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 H1F0P07305 194 aaKnown RBP7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 CHRFAM7AQ494W8 412 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 LHX8Q68G74 356 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 GPR137CQ8N3F9 429 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 RCBTB1Q8NDN9 531 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 ZUFSPQ96AP4 578 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 CCDC120Q96HB5 630 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 COL21A1Q96P44 957 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 SLC46A2Q9BY10 475 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 POLR2J2Q9GZM3 115 aaKnown RBP7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 PELI2Q9HAT8 420 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 MT-CO2P00403 227 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 LHCGRP22888 699 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 RBMXP38159 391 aaKnown RBP7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 ETV3P41162 512 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 OR13C4Q8NGS5 318 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 OR9A4Q8NGU2 314 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 TIMM8BQ9Y5J9 83 aaPredicted RBP7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 UGT1A9O60656 530 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 HEXAP06865 529 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 UGT1A6P19224 532 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 BDKRB1P46663 353 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 RBM20Q5T481 1227 aaKnown RBP7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 CEACAM20Q6UY09 585 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 RBM44Q6ZP01 1051 aaKnown RBP7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 SPEM1Q8N4L4 309 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 TANKQ92844 425 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 OR1F2PQ96R84 312 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 UGT1A7Q9HAW7 530 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 UGT1A10Q9HAW8 530 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 UGT1A8Q9HAW9 530 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 ANKMY1Q9P2S6 941 aa7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 NOP16Q9Y3C1 178 aaKnown RBP7.96□□□□□ -1.13
PCDHB1-201ENST00000306549 ZNF236Q9UL36 1845 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 KIF26BQ2KJY2 2108 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 RPP14O95059 124 aaKnown RBP7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 C1GALT1C1LP0DN25 315 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 FOLR3P41439 243 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 ZNF81P51508 661 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 CDH15P55291 814 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 PMS2P3Q13401 168 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 NFE2L1Q14494 772 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 OR8S1Q8NH09 359 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 OR10A6Q8NH74 314 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 APOOQ9BUR5 198 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 CDH20Q9HBT6 801 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 VNN3Q9NY84 501 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 A0A0J9YY10 115 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 PRSS51A0A1B0GVH4 220 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 IFNA10P01566 189 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 GALNT1Q10472 559 aaPredicted RBP7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 COL9A3Q14050 684 aaPredicted RBP7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 CATSPEREQ5SY80 951 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 NPAS3Q8IXF0 933 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 NAXEQ8NCW5 288 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 HSPA12BQ96MM6 686 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 URM1Q9BTM9 101 aaKnown RBP7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 ABRACLQ9P1F3 81 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 KLHL13Q9P2N7 655 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 DOCK9Q9BZ29 2069 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 BLOC1S5-TXNDC5H3BN57 136 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 AP1G1O43747 822 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 IFNA7P01567 189 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 CHRM1P11229 460 aaPredicted RBP7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 MPSTP25325 297 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 CCR5P51681 352 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 MXD1Q05195 221 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 CA9Q16790 459 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 TOR1AIP2Q8NFQ8 470 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 HTRA1Q92743 480 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 ASB16Q96NS5 453 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 MAP3K3Q99759 626 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 OR8D2Q9GZM6 311 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 A0A0G2JPF8 293 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 HNRNPCL3B7ZW38 293 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 DLX3O60479 287 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 OR4F21O95013 312 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 HNRNPCL4P0DMR1 293 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 FASLGP48023 281 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 PTDSS1P48651 473 aaKnown RBP7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 TRA2BP62995 288 aaKnown RBP7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 NFATC4Q14934 902 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 RAET1LQ5VY80 246 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 GLT8D1Q68CQ7 371 aa7.96□□□□□ -1.14
PCDHB1-201ENST00000306549 REP15Q6BDI9 236 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms