RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 STEAP3Q658P3 488 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 NKX1-2Q9UD57 310 aaPredicted RBP12.86□□□□□ -0.35
TRIM56-201ENST00000306085 ASB3Q9Y575 518 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 A0A1W2PPW3 197 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 CILPO75339 1184 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 BCORL1Q5H9F3 1711 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 RNF128Q8TEB7 428 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 ZNF536O15090 1300 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 A0A1W2PPV4 95 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 OR51F1A6NGY5 319 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 D6RAR5 112 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 RTCAO00442 366 aaKnown RBP12.86□□□□□ -0.35
TRIM56-201ENST00000306085 SCO1O75880 301 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 HOXA9P31269 272 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 RNASE10Q5GAN6 216 aaKnown RBP12.86□□□□□ -0.35
TRIM56-201ENST00000306085 KLBQ86Z14 1044 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 GJD4Q96KN9 370 aaPredicted RBP12.86□□□□□ -0.35
TRIM56-201ENST00000306085 REEP4Q9H6H4 257 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 FBRSL1Q9HCM7 1045 aaKnown RBP12.86□□□□□ -0.35
TRIM56-201ENST00000306085 NCDNQ9UBB6 729 aa12.86□□□□□ -0.35
TRIM56-201ENST00000306085 TMEM233B4DJY2 109 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 ZNF43P17038 809 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 SLC36A3Q495N2 470 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 IGFN1Q86VF2 1251 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 XYLT1Q86Y38 959 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 SGPP2Q8IWX5 399 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 PGAP3Q96FM1 320 aaPredicted RBP12.85□□□□□ -0.35
TRIM56-201ENST00000306085 HCN4Q9Y3Q4 1203 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 DDTLA6NHG4 134 aaPredicted RBP12.85□□□□□ -0.35
TRIM56-201ENST00000306085 BEST1O76090 585 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 GRIN2CQ14957 1233 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 RAET1LQ5VY80 246 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 SGIP1Q9BQI5 828 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 XPNPEP1Q9NQW7 623 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 WNT9AO14904 365 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 UFM1P61960 85 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 ACTC1P68032 377 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 ACTA1P68133 377 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 PLD4Q96BZ4 506 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 TXNL4BQ9NX01 149 aaKnown RBP12.85□□□□□ -0.35
TRIM56-201ENST00000306085 ACSL6Q9UKU0 697 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 VSX2P58304 361 aaPredicted RBP12.85□□□□□ -0.35
TRIM56-201ENST00000306085 POU4F2Q12837 409 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 CCINQ13939 588 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 POU4F3Q15319 338 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 CMIPQ8IY22 773 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 KCNQ5Q9NR82 932 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 GHRLQ9UBU3 117 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 FZD1Q9UP38 647 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 MRPS17Q9Y2R5 130 aaKnown RBP12.85□□□□□ -0.35
TRIM56-201ENST00000306085 LPLP06858 475 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 SERPINE2P07093 398 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 BRCC3P46736 316 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 MRPS34P82930 218 aaKnown RBP12.85□□□□□ -0.35
TRIM56-201ENST00000306085 CCBE1Q6UXH8 406 aaPredicted RBP12.85□□□□□ -0.35
TRIM56-201ENST00000306085 ZNF572Q7Z3I7 529 aaPredicted RBP12.85□□□□□ -0.35
TRIM56-201ENST00000306085 OR4E2Q8NGC2 313 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 ZIM2Q9NZV7 527 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 TMEM9Q9P0T7 183 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 NDUFV2P19404 249 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 MAPK15Q8TD08 544 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 TMEM74Q96NL1 305 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 MTFR1LQ9H019 292 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 PATZ1Q9HBE1 687 aaKnown RBP12.85□□□□□ -0.35
TRIM56-201ENST00000306085 TTC24A2A3L6 582 aaPredicted RBP12.85□□□□□ -0.35
TRIM56-201ENST00000306085 CYB5BO43169 146 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 SLC22A5O76082 557 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 ALDOBP05062 364 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 TMEM225BP0DP42 221 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 ZNF585AQ6P3V2 769 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 STRADAQ7RTN6 431 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 NLGN4XQ8N0W4 816 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.85□□□□□ -0.359e-7■■■■□ 25.1
TRIM56-201ENST00000306085 SCO2O43819 266 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 CREB1P16220 341 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 PIGFQ07326 219 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 KANSL1Q7Z3B3 1105 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 CYB5D2Q8WUJ1 264 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 ZFAND2BQ8WV99 257 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 CACNG6Q9BXT2 260 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 OR51B6Q9H340 312 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 UNC13CQ8NB66 2214 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 CRYBB1P53674 252 aaPredicted RBP12.85□□□□□ -0.35
TRIM56-201ENST00000306085 UBE2KP61086 200 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 SLC27A4Q6P1M0 643 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 DCAF16Q9NXF7 216 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 PCDHB3Q9Y5E6 796 aa12.85□□□□□ -0.35
TRIM56-201ENST00000306085 FPR1P21462 350 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 BTN1A1Q13410 526 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 KCNJ11Q14654 390 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 FAM58AQ8N1B3 248 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 ZFP41Q8N8Y5 198 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 SLA2Q9H6Q3 261 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 MPDZO75970 2070 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 TSPAN11A1L157 253 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 CLEC3BP05452 202 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 FAM111BQ6SJ93 734 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 TECPR1Q7Z6L1 1165 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 SCML4Q8N228 414 aa12.84□□□□□ -0.35
TRIM56-201ENST00000306085 TSTD1Q8NFU3 115 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms