RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 GPR34Q9UPC5 381 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 PRG3Q9Y2Y8 225 aaPredicted RBP5.15□□□□□ -1.58
VPS50-202ENST00000305866 CMAHPQ9Y471 501 aa5.15□□□□□ -1.58
VPS50-202ENST00000305866 TMEM129A0AVI4 362 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 ZBBXA8MT70 800 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 EVPLLA8MZ36 301 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 MPZL2O60487 215 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 GPR37L1O60883 481 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 CRCPO75575 148 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 EPN2O95208 641 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 NTN1O95631 604 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 IL9P15248 144 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 GALP22466 123 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 IMPA1P29218 277 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 NNMTP40261 264 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 KIR3DL1P43629 444 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 SOX9P48436 509 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 EPHB3P54753 998 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 POLR2LP62875 67 aaKnown RBP5.15□□□□□ -1.59
VPS50-202ENST00000305866 DMPKQ09013 629 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 RPA4Q13156 261 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 ENPP2Q13822 863 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 SLC5A12Q1EHB4 618 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 XKR6Q5GH73 641 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 GPR139Q6DWJ6 353 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 ACSM5Q6NUN0 579 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 FAM151BQ6UXP7 276 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 PXKQ7Z7A4 578 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 RBM45Q8IUH3 476 aaKnown RBP5.15□□□□□ -1.59
VPS50-202ENST00000305866 PEX5LQ8IYB4 626 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 AMER2Q8N7J2 671 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 TMIEQ8NEW7 156 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 CIDECQ96AQ7 238 aaPredicted RBP5.15□□□□□ -1.59
VPS50-202ENST00000305866 ZNF582Q96NG8 517 aaPredicted RBP5.15□□□□□ -1.59
VPS50-202ENST00000305866 RBP7Q96R05 134 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 GFI1Q99684 422 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 POLDIP3Q9BY77 421 aaKnown RBP5.15□□□□□ -1.59
VPS50-202ENST00000305866 C6orf62Q9GZU0 229 aaPredicted RBP5.15□□□□□ -1.59
VPS50-202ENST00000305866 B3GNT2Q9NY97 397 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 PCDHGB7Q9Y5F8 929 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 ENPP4Q9Y6X5 453 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 ARHGEF33A8MVX0 844 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 FADS2P1A8MWK0 482 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 PROM1O43490 865 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 SLC43A1O75387 559 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 GMNNO75496 209 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 PCDH8O95206 1070 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 LRATO95237 230 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 DLGAP3O95886 979 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 MYCP01106 439 aaPredicted RBP5.15□□□□□ -1.59
VPS50-202ENST00000305866 ANXA8P13928 327 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 TIMP2P16035 220 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 APEX1P27695 318 aaKnown RBP5.15□□□□□ -1.59
VPS50-202ENST00000305866 TIA1P31483 386 aaKnown RBP eCLIP5.15□□□□□ -1.59
VPS50-202ENST00000305866 ARPC4P59998 168 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 TWF1Q12792 350 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 NOGQ13253 232 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 GAB4Q2WGN9 574 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 C3orf38Q5JPI3 329 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 AADACL4Q5VUY2 407 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 TEX261Q6UWH6 196 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 LCTLQ6UWM7 567 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 HSDL2Q6YN16 418 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 ZNF782Q6ZMW2 699 aaPredicted RBP5.15□□□□□ -1.59
VPS50-202ENST00000305866 UBE2R2Q712K3 238 aaPredicted RBP5.15□□□□□ -1.59
VPS50-202ENST00000305866 TAS2R42Q7RTR8 314 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 GATAD2AQ86YP4 633 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 NPAS3Q8IXF0 933 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 SYTL1Q8IYJ3 562 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 LGI4Q8N135 537 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 OR5H6Q8NGV6 325 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 MAPKAP1Q9BPZ7 522 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 CCDC90BQ9GZT6 254 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 NUAK2Q9H093 628 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 PELI2Q9HAT8 420 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 RBFOX1Q9NWB1 397 aaKnown RBP5.15□□□□□ -1.59
VPS50-202ENST00000305866 WWOXQ9NZC7 414 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 ENOPH1Q9UHY7 261 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 STON1Q9Y6Q2 735 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 U3KQ87 197 aa5.15□□□□□ -1.59
VPS50-202ENST00000305866 A0A1B0GTQ1 180 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 EFCAB10A6NFE3 127 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 GPR89AB7ZAQ6 455 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 C4orf51C9J302 202 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 C5orf67F2Z3F1 127 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 TNFRSF11BO00300 401 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 PLK4O00444 970 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 C1orf105O95561 183 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 GUCA1CO95843 209 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 CFDP00746 253 aaPredicted RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 GPR89BP0CG08 455 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 CKMT1AP12532 417 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ICAM2P13598 275 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 OSMP13725 252 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 ARSBP15848 533 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 GKP32189 559 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 HTR2BP41595 481 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 BDKRB1P46663 353 aa5.14□□□□□ -1.59
VPS50-202ENST00000305866 WDR5P61964 334 aaKnown RBP5.14□□□□□ -1.59
VPS50-202ENST00000305866 SIM1P81133 766 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms