RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 C6orf47O95873 294 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 NAT2P11245 290 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 POU2F1P14859 743 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 ERP29P30040 261 aaKnown RBP15.33■□□□□ 0.04
LONRF3-201ENST00000304778 GJA4P35212 333 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 SOX6P35712 828 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 P2RY2P41231 377 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 RPS5P46782 204 aaKnown RBP15.33■□□□□ 0.04
LONRF3-201ENST00000304778 LIMK1P53667 647 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 RUNX3Q13761 415 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 TMEM52BQ4KMG9 183 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 OR9Q2Q8NGE9 314 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 REPS1Q96D71 796 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 ZCCHC2Q9C0B9 1178 aaKnown RBP15.33■□□□□ 0.04
LONRF3-201ENST00000304778 NINQ8N4C6 2090 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 OLR1P78380 273 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 DPTQ07507 201 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 ST3GAL4Q11206 333 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 ARMCX4Q5H9R4 360 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 ZNF547Q8IVP9 402 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 OXR1Q8N573 874 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 YIPF7Q8N8F6 280 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 LMNTD1Q8N9Z9 388 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 GEMIN6Q8WXD5 167 aaKnown RBP15.33■□□□□ 0.04
LONRF3-201ENST00000304778 OR5M11Q96RB7 305 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 ZNF556Q9HAH1 456 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 DUSP12Q9UNI6 340 aa15.33■□□□□ 0.04
LONRF3-201ENST00000304778 EPOPA6NHQ4 379 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 TRIM77I1YAP6 450 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 MTRF1O75570 445 aaKnown RBP15.32■□□□□ 0.04
LONRF3-201ENST00000304778 CCNYL3P0C7X3 344 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 MAPK9P45984 424 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 RGS6P49758 472 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 CNTN1Q12860 1018 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 BTBD16Q32M84 506 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 PAMR1Q6UXH9 720 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 COMMD6Q7Z4G1 85 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 PLA2G15Q8NCC3 412 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 GALNT6Q8NCL4 622 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 CXorf40AQ8TE69 158 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 C17orf62Q9BQA9 187 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 C1QTNF7Q9BXJ2 289 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 PBX4Q9BYU1 374 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 C1GALT1Q9NS00 363 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 ACSL6Q9UKU0 697 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 NUP50Q9UKX7 468 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 DNMT3AQ9Y6K1 912 aaPredicted RBP15.32■□□□□ 0.04
LONRF3-201ENST00000304778 COL4A3Q01955 1670 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 TEX51A0A1B0GUA7 166 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 OR5K3A6NET4 321 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 J3KTA2 159 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 OR7A10O76100 309 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 FURINP09958 794 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 ATF4P18848 351 aaPredicted RBP15.32■□□□□ 0.04
LONRF3-201ENST00000304778 TIE1P35590 1138 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 PRIM2P49643 509 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 EEF1A2Q05639 463 aaKnown RBP15.32■□□□□ 0.04
LONRF3-201ENST00000304778 PDE7AQ13946 482 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 CACUL1Q86Y37 369 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 LSM14AQ8ND56 463 aaKnown RBP15.32■□□□□ 0.04
LONRF3-201ENST00000304778 ZNF480Q8WV37 535 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 CIDECQ96AQ7 238 aaPredicted RBP15.32■□□□□ 0.04
LONRF3-201ENST00000304778 CHFRQ96EP1 664 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 CRELD1Q96HD1 420 aa15.32■□□□□ 0.04
LONRF3-201ENST00000304778 THAP10Q9P2Z0 257 aaPredicted RBP15.32■□□□□ 0.04
LONRF3-201ENST00000304778 A0A1W2PQ09 198 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 CCDC182A6NF36 153 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 C1QTNF3-AMACRE9PGA6 284 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 PDPK1O15530 556 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 KIAA0513O60268 411 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 POP7O75817 140 aaKnown RBP15.31■□□□□ 0.04
LONRF3-201ENST00000304778 POU3F3P20264 500 aaPredicted RBP15.31■□□□□ 0.04
LONRF3-201ENST00000304778 XCR1P46094 333 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 LIMS1P48059 325 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 MAPK12P53778 367 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 TBPL1P62380 186 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 CDK6Q00534 326 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 BNC1Q01954 994 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 CRB2Q5IJ48 1285 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 TRIM40Q6P9F5 258 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 ZNF367Q7RTV3 350 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 TRMT11Q7Z4G4 463 aaKnown RBP15.31■□□□□ 0.04
LONRF3-201ENST00000304778 VANGL1Q8TAA9 524 aaPredicted RBP15.31■□□□□ 0.04
LONRF3-201ENST00000304778 PIP5K1AQ99755 562 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 TIGARQ9NQ88 270 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 TRAPPC4Q9Y296 219 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 PRKAB1Q9Y478 270 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 PCYT1BQ9Y5K3 369 aaPredicted RBP15.31■□□□□ 0.04
LONRF3-201ENST00000304778 A0A0B4J293 547 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 SMIM30A4D0T7 59 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 RFXAPO00287 272 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 GPR37L1O60883 481 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 KAT7O95251 611 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 GBAP04062 536 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 CSF2P04141 144 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 CHRM5P08912 532 aaPredicted RBP15.31■□□□□ 0.04
LONRF3-201ENST00000304778 MYL9P24844 172 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 WASP42768 502 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 MPEG1Q2M385 716 aa15.31■□□□□ 0.04
LONRF3-201ENST00000304778 KCTD20Q7Z5Y7 419 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms