RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 MPEG1Q2M385 716 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 OR1N1Q8NGS0 311 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 OR9A2Q8NGT5 310 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 TESCQ96BS2 214 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 FBXL20Q96IG2 436 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 TEX37Q96LM6 180 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 AMDHD1Q96NU7 426 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 ELAC2Q9BQ52 826 aaKnown RBP22.82■■□□□ 1.24
HOXC9-201ENST00000303450 DUSP26Q9BV47 211 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 LHPPQ9H008 270 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 GLIPR2Q9H4G4 154 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 CLMPQ9H6B4 373 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 ZIM2Q9NZV7 527 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 ERVK-19Q9WJR5 959 aa22.82■■□□□ 1.24
HOXC9-201ENST00000303450 DOCK10Q96BY6 2186 aa22.81■■□□□ 1.24
HOXC9-201ENST00000303450 DRD4P21917 467 aa22.81■■□□□ 1.24
HOXC9-201ENST00000303450 CLCN2P51788 898 aa22.81■■□□□ 1.24
HOXC9-201ENST00000303450 GPR143P51810 404 aa22.81■■□□□ 1.24
HOXC9-201ENST00000303450 MANFP55145 182 aaKnown RBP22.81■■□□□ 1.24
HOXC9-201ENST00000303450 SOX8P57073 446 aa22.81■■□□□ 1.24
HOXC9-201ENST00000303450 SRSF11Q05519 484 aaKnown RBP22.81■■□□□ 1.24
HOXC9-201ENST00000303450 LTB4RQ15722 352 aa22.81■■□□□ 1.24
HOXC9-201ENST00000303450 DPY19L1Q2PZI1 675 aa22.81■■□□□ 1.24
HOXC9-201ENST00000303450 PRICKLE4Q2TBC4 344 aa22.81■■□□□ 1.24
HOXC9-201ENST00000303450 METTL21CQ5VZV1 264 aa22.81■■□□□ 1.24
HOXC9-201ENST00000303450 CAMKMTQ7Z624 323 aa22.81■■□□□ 1.24
HOXC9-201ENST00000303450 VWA5B2Q8N398 1253 aa22.81■■□□□ 1.24
HOXC9-201ENST00000303450 GLB1L3Q8NCI6 653 aaPredicted RBP22.81■■□□□ 1.24
HOXC9-201ENST00000303450 APCDD1LQ8NCL9 501 aa22.81■■□□□ 1.24
HOXC9-201ENST00000303450 ZFP28Q8NHY6 868 aa22.81■■□□□ 1.24
HOXC9-201ENST00000303450 ELP5Q8TE02 316 aa22.81■■□□□ 1.24
HOXC9-201ENST00000303450 BHLHE41Q9C0J9 482 aaPredicted RBP22.81■■□□□ 1.24
HOXC9-201ENST00000303450 SLAMF7Q9NQ25 335 aa22.81■■□□□ 1.24
HOXC9-201ENST00000303450 MAT2BQ9NZL9 334 aa22.81■■□□□ 1.24
HOXC9-201ENST00000303450 ADAM21Q9UKJ8 722 aa22.81■■□□□ 1.24
HOXC9-201ENST00000303450 HRKO00198 91 aa22.8■■□□□ 1.24
HOXC9-201ENST00000303450 CT62P0C5K7 136 aa22.8■■□□□ 1.24
HOXC9-201ENST00000303450 ITGAMP11215 1152 aa22.8■■□□□ 1.24
HOXC9-201ENST00000303450 KIR3DL1P43629 444 aa22.8■■□□□ 1.24
HOXC9-201ENST00000303450 IRX1P78414 480 aaPredicted RBP22.8■■□□□ 1.24
HOXC9-201ENST00000303450 MAP4K2Q12851 820 aa22.8■■□□□ 1.24
HOXC9-201ENST00000303450 JMJD6Q6NYC1 403 aaPredicted RBP22.8■■□□□ 1.24
HOXC9-201ENST00000303450 SPATA21Q7Z572 469 aa22.8■■□□□ 1.24
HOXC9-201ENST00000303450 KIF2BQ8N4N8 673 aa22.8■■□□□ 1.24
HOXC9-201ENST00000303450 ZNF675Q8TD23 568 aa22.8■■□□□ 1.24
HOXC9-201ENST00000303450 ZNF721Q8TF20 911 aa22.8■■□□□ 1.24
HOXC9-201ENST00000303450 ARHGAP9Q9BRR9 750 aa22.8■■□□□ 1.24
HOXC9-201ENST00000303450 ACSS1Q9NUB1 689 aaPredicted RBP22.8■■□□□ 1.24
HOXC9-201ENST00000303450 COPG1Q9Y678 874 aaKnown RBP22.8■■□□□ 1.24
HOXC9-201ENST00000303450 EFNA1P20827 205 aaPredicted RBP22.79■■□□□ 1.24
HOXC9-201ENST00000303450 FRKP42685 505 aaPredicted RBP22.79■■□□□ 1.24
HOXC9-201ENST00000303450 POLE2P56282 527 aa22.79■■□□□ 1.24
HOXC9-201ENST00000303450 MRPS35P82673 323 aaKnown RBP22.79■■□□□ 1.24
HOXC9-201ENST00000303450 RHDQ02161 417 aa22.79■■□□□ 1.24
HOXC9-201ENST00000303450 HSPB3Q12988 150 aa22.79■■□□□ 1.24
HOXC9-201ENST00000303450 RAPSNQ13702 412 aa22.79■■□□□ 1.24
HOXC9-201ENST00000303450 FAM174BQ3ZCQ3 159 aa22.79■■□□□ 1.24
HOXC9-201ENST00000303450 ZNF628Q5EBL2 1059 aa22.79■■□□□ 1.24
HOXC9-201ENST00000303450 SPANXN4Q5MJ08 99 aa22.79■■□□□ 1.24
HOXC9-201ENST00000303450 PAOXQ6QHF9 649 aa22.79■■□□□ 1.24
HOXC9-201ENST00000303450 FAM111BQ6SJ93 734 aa22.79■■□□□ 1.24
HOXC9-201ENST00000303450 ZNF551Q7Z340 670 aaPredicted RBP22.79■■□□□ 1.24
HOXC9-201ENST00000303450 ZNF321PQ8N8H1 164 aa22.79■■□□□ 1.24
HOXC9-201ENST00000303450 OR8J2Q8NGG1 315 aa22.79■■□□□ 1.24
HOXC9-201ENST00000303450 BRIX1Q8TDN6 353 aaKnown RBP22.79■■□□□ 1.24
HOXC9-201ENST00000303450 C10orf82Q8WW14 230 aa22.79■■□□□ 1.24
HOXC9-201ENST00000303450 KAT2AQ92830 837 aa22.79■■□□□ 1.24
HOXC9-201ENST00000303450 NUDT9Q9BW91 350 aa22.79■■□□□ 1.24
HOXC9-201ENST00000303450 SEMA4CQ9C0C4 833 aa22.79■■□□□ 1.24
HOXC9-201ENST00000303450 CACNA1BQ00975 2339 aa22.79■■□□□ 1.24
HOXC9-201ENST00000303450 TRBV11-1A0A0K0K1C0 115 aa22.78■■□□□ 1.24
HOXC9-201ENST00000303450 A0A1W2PRB8 838 aa22.78■■□□□ 1.24
HOXC9-201ENST00000303450 A8MUI8 341 aa22.78■■□□□ 1.24
HOXC9-201ENST00000303450 C9JVG2 144 aa22.78■■□□□ 1.24
HOXC9-201ENST00000303450 IGKV3-11P04433 115 aa22.78■■□□□ 1.24
HOXC9-201ENST00000303450 GPX3P22352 226 aa22.78■■□□□ 1.24
HOXC9-201ENST00000303450 IL12AP29459 219 aa22.78■■□□□ 1.24
HOXC9-201ENST00000303450 S100A3P33764 101 aa22.78■■□□□ 1.24
HOXC9-201ENST00000303450 GPC1P35052 558 aa22.78■■□□□ 1.24
HOXC9-201ENST00000303450 MRPL19P49406 292 aaKnown RBP22.78■■□□□ 1.24
HOXC9-201ENST00000303450 ATP4BP51164 291 aa22.78■■□□□ 1.24
HOXC9-201ENST00000303450 MGAT2Q10469 447 aa22.78■■□□□ 1.24
HOXC9-201ENST00000303450 SQLEQ14534 574 aa22.78■■□□□ 1.24
HOXC9-201ENST00000303450 MYBPC3Q14896 1274 aa22.78■■□□□ 1.24
HOXC9-201ENST00000303450 OR4F3Q6IEY1 312 aa22.78■■□□□ 1.24
HOXC9-201ENST00000303450 OR9I1Q8NGQ6 314 aa22.78■■□□□ 1.24
HOXC9-201ENST00000303450 DEFB126Q9BYW3 111 aa22.78■■□□□ 1.24
HOXC9-201ENST00000303450 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.78■■□□□ 1.24
HOXC9-201ENST00000303450 GPR83Q9NYM4 423 aa22.78■■□□□ 1.24
HOXC9-201ENST00000303450 SLITRK5O94991 958 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 SSTR4P31391 388 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 FUT7Q11130 342 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 TRMT12Q53H54 448 aaKnown RBP22.77■■□□□ 1.24
HOXC9-201ENST00000303450 HSDL2Q6YN16 418 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 RNF111Q6ZNA4 994 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 SIRT6Q8N6T7 355 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 VPS37AQ8NEZ2 397 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 FDCSPQ8NFU4 85 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 CTHRC1Q96CG8 243 aa22.77■■□□□ 1.24
HOXC9-201ENST00000303450 EPN3Q9H201 632 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms