RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 PGBD2Q6P3X8 592 aa13.14□□□□□ -0.31
KARS-201ENST00000302445 BMP8AQ7Z5Y6 402 aa13.14□□□□□ -0.31
KARS-201ENST00000302445 LRRC28Q86X40 367 aaPredicted RBP13.14□□□□□ -0.31
KARS-201ENST00000302445 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.14□□□□□ -0.31
KARS-201ENST00000302445 TRPV1Q8NER1 839 aa13.14□□□□□ -0.31
KARS-201ENST00000302445 OR7G3Q8NG95 312 aa13.14□□□□□ -0.31
KARS-201ENST00000302445 NPLOC4Q8TAT6 608 aa13.14□□□□□ -0.31
KARS-201ENST00000302445 PHF21AQ96BD5 680 aa13.14□□□□□ -0.31
KARS-201ENST00000302445 PDXPQ96GD0 296 aa13.14□□□□□ -0.31
KARS-201ENST00000302445 ZNF582Q96NG8 517 aaPredicted RBP13.14□□□□□ -0.31
KARS-201ENST00000302445 P2RY13Q9BPV8 354 aa13.14□□□□□ -0.31
KARS-201ENST00000302445 WRAP53Q9BUR4 548 aaKnown RBP13.14□□□□□ -0.31
KARS-201ENST00000302445 SEMA3GQ9NS98 782 aa13.14□□□□□ -0.31
KARS-201ENST00000302445 MED9Q9NWA0 146 aa13.14□□□□□ -0.31
KARS-201ENST00000302445 GLS2Q9UI32 602 aa13.14□□□□□ -0.31
KARS-201ENST00000302445 KIF25Q9UIL4 384 aa13.14□□□□□ -0.31
KARS-201ENST00000302445 LZTS3O60299 673 aaPredicted RBP13.13□□□□□ -0.31
KARS-201ENST00000302445 OR10H3O60404 316 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 TP53P04637 393 aaPredicted RBP13.13□□□□□ -0.31
KARS-201ENST00000302445 ZP3P21754 424 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 RBMS1P29558 406 aaKnown RBP13.13□□□□□ -0.31
KARS-201ENST00000302445 CHI3L1P36222 383 aaPredicted RBP13.13□□□□□ -0.31
KARS-201ENST00000302445 AGFG1P52594 562 aaKnown RBP13.13□□□□□ -0.31
KARS-201ENST00000302445 DSTNP60981 165 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 ZNF284Q2VY69 593 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 LEXMQ3ZCV2 418 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 MINDY4Q4G0A6 757 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 ZNF852Q6ZMS4 543 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 PLEKHM3Q6ZWE6 761 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 ZNF485Q8NCK3 441 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 TMEM203Q969S6 136 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 RFT1Q96AA3 541 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 MSANTD3Q96H12 275 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 ADARB2Q9NS39 739 aaKnown RBP13.13□□□□□ -0.31
KARS-201ENST00000302445 AFF4Q9UHB7 1163 aaKnown RBP13.13□□□□□ -0.31
KARS-201ENST00000302445 C6orf47O95873 294 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 IFNA16P05015 189 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 HOXD4P09016 255 aaPredicted RBP13.13□□□□□ -0.31
KARS-201ENST00000302445 FURINP09958 794 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 ITPKAP23677 461 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 FEN1P39748 380 aaKnown RBP13.13□□□□□ -0.31
KARS-201ENST00000302445 RFX3P48380 749 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 DOC2AQ14183 400 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 NFE2L1Q14494 772 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 PUM1Q14671 1186 aaKnown RBP eCLIP13.13□□□□□ -0.313e-6■□□□□ 9.3
KARS-201ENST00000302445 ZNF385BQ569K4 471 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 GARNL3Q5VVW2 1013 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 SLC36A4Q6YBV0 504 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 USP45Q70EL2 814 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 FGD2Q7Z6J4 655 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 MRGPREQ86SM8 312 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 ZNF655Q8N720 491 aaPredicted RBP13.13□□□□□ -0.31
KARS-201ENST00000302445 SYT14Q8NB59 555 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 OVCA2Q8WZ82 227 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 OTUB1Q96FW1 271 aaPredicted RBP13.13□□□□□ -0.31
KARS-201ENST00000302445 TOE1Q96GM8 510 aaKnown RBP13.13□□□□□ -0.31
KARS-201ENST00000302445 MTERF1Q99551 399 aaKnown RBP13.13□□□□□ -0.31
KARS-201ENST00000302445 DPAGT1Q9H3H5 408 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 A4GALTQ9NPC4 353 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 MYNNQ9NPC7 610 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 NPDC1Q9NQX5 325 aaPredicted RBP13.13□□□□□ -0.31
KARS-201ENST00000302445 EXO1Q9UQ84 846 aaKnown RBP13.13□□□□□ -0.31
KARS-201ENST00000302445 MAB21L2Q9Y586 359 aa13.13□□□□□ -0.31
KARS-201ENST00000302445 GNG14A0A1W2PPG7 69 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 MTMR11A4FU01 709 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 CARNS1A5YM72 827 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 KHNYNO15037 678 aaKnown RBP13.12□□□□□ -0.31
KARS-201ENST00000302445 AKAP8O43823 692 aaKnown RBP13.12□□□□□ -0.31
KARS-201ENST00000302445 CELF2O95319 508 aaKnown RBP13.12□□□□□ -0.31
KARS-201ENST00000302445 SOX14O95416 240 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 GSTM3P21266 225 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 SMSP52788 366 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 ARPP19P56211 112 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 CDK5Q00535 292 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 SEMG2Q02383 582 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 DSC1Q08554 894 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 EXOSC2Q13868 293 aaKnown RBP13.12□□□□□ -0.31
KARS-201ENST00000302445 TMIGD1Q6UXZ0 262 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 ADGRD2Q7Z7M1 963 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 THOC6Q86W42 341 aaKnown RBP13.12□□□□□ -0.31
KARS-201ENST00000302445 RNF175Q8N4F7 328 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 OR11H7Q8NGC8 314 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 OR5M3Q8NGP4 307 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 NEIL3Q8TAT5 605 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 C2orf15Q8WU43 125 aaKnown RBP13.12□□□□□ -0.31
KARS-201ENST00000302445 SMG7Q92540 1137 aaKnown RBP13.12□□□□□ -0.31
KARS-201ENST00000302445 RBPMSQ93062 196 aaKnown RBP13.12□□□□□ -0.31
KARS-201ENST00000302445 LRR1Q96L50 414 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 B3GALT6Q96L58 329 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 C7orf50Q9BRJ6 194 aaKnown RBP13.12□□□□□ -0.31
KARS-201ENST00000302445 SGK2Q9HBY8 427 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 CYSLTR2Q9NS75 346 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 SLCO1C1Q9NYB5 712 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 ZNF224Q9NZL3 707 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 PADI3Q9ULW8 664 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 ICKQ9UPZ9 632 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 VWA8A3KMH1 1905 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 FRMPD3Q5JV73 1810 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 SCN10AQ9Y5Y9 1956 aa13.12□□□□□ -0.31
KARS-201ENST00000302445 TLX2O43763 284 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms