RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 JPH3Q8WXH2 748 aaPredicted RBP12.88□□□□□ -0.35
CDH8-201ENST00000299345 AMDHD1Q96NU7 426 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 ZNF717Q9BY31 904 aaPredicted RBP12.88□□□□□ -0.35
CDH8-201ENST00000299345 FZD3Q9NPG1 666 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 KLHL28Q9NXS3 571 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 KLHL3Q9UH77 587 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 PLEKHM1Q9Y4G2 1056 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 ZNF780BQ9Y6R6 833 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 PLXNA2O75051 1894 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 LTBP2Q14767 1821 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 KRBA1A5PL33 1030 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 LRIT2A6NDA9 550 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 TLX2O43763 284 aaPredicted RBP12.88□□□□□ -0.35
CDH8-201ENST00000299345 TBX19O60806 448 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 CKMT1AP12532 417 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 PXNP49023 591 aaPredicted RBP12.88□□□□□ -0.35
CDH8-201ENST00000299345 RUNX1T1Q06455 604 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 C16orf62Q7Z3J2 963 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 OR8J1Q8NGP2 316 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 OR2A1Q8NGT9 310 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 LCN9Q8WX39 176 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 OR5M11Q96RB7 305 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 TEX101Q9BY14 249 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 SLC17A9Q9BYT1 436 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 SERGEFQ9UGK8 458 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 OSGIN1Q9UJX0 560 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 PAIP2BQ9ULR5 123 aaKnown RBP12.88□□□□□ -0.35
CDH8-201ENST00000299345 SLC6A14Q9UN76 642 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 F5P12259 2224 aa12.88□□□□□ -0.35
CDH8-201ENST00000299345 MKI67P46013 3256 aaKnown RBP12.88□□□□□ -0.35
CDH8-201ENST00000299345 TRBV23OR9-2A0A075B6M9 112 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 MAGP20916 626 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 MPIP34949 423 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 UGT2B10P36537 528 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 EIF2B2P49770 351 aaKnown RBP12.87□□□□□ -0.35
CDH8-201ENST00000299345 PCBP4P57723 403 aaKnown RBP12.87□□□□□ -0.35
CDH8-201ENST00000299345 TAS2R41P59536 307 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 OXA1LQ15070 435 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 UAP1L1Q3KQV9 507 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 ACOT4Q8N9L9 421 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 HTRA1Q92743 480 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 UCN3Q969E3 161 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 SIRT3Q9NTG7 399 aaPredicted RBP12.87□□□□□ -0.35
CDH8-201ENST00000299345 PEX16Q9Y5Y5 336 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 COLEC10Q9Y6Z7 277 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 PMF1-BGLAPU3KQ54 211 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 C5orf67F2Z3F1 127 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 FFAR1O14842 300 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 HMGN2P05204 90 aaKnown RBP12.87□□□□□ -0.35
CDH8-201ENST00000299345 IGFBP1P08833 259 aaPredicted RBP12.87□□□□□ -0.35
CDH8-201ENST00000299345 POU2F2P09086 479 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 PORP16435 677 aaPredicted RBP12.87□□□□□ -0.35
CDH8-201ENST00000299345 HIST1H1TP22492 207 aaPredicted RBP12.87□□□□□ -0.35
CDH8-201ENST00000299345 PSMA1P25786 263 aaKnown RBP12.87□□□□□ -0.35
CDH8-201ENST00000299345 ILKQ13418 452 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 SNAPC1Q16533 368 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 ITPRIPL2Q3MIP1 535 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 IQCHQ86VS3 1027 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 MFSD4AQ8N468 514 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 OR4K5Q8NGD3 323 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 BBS10Q8TAM1 723 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 TMEM80Q96HE8 168 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 TIMM29Q9BSF4 260 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 CENPOQ9BU64 300 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 CNPPD1Q9BV87 410 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 KLHL31Q9H511 634 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 MVB12BQ9H7P6 319 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 FTSJ1Q9UET6 329 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 CFL2Q9Y281 166 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 MYO10Q9HD67 2058 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 A0A1W2PPV9 198 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 ARRDC5A6NEK1 342 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 KIAA0513O60268 411 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 TBX6O95947 436 aaPredicted RBP12.87□□□□□ -0.35
CDH8-201ENST00000299345 APOA1P02647 267 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 ERGP11308 486 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 IFNGR2P38484 337 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 DEFA1P59665 94 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 DEFA3P59666 94 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 ERVK-21P61565 698 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 STXBP1P61764 594 aaKnown RBP12.87□□□□□ -0.35
CDH8-201ENST00000299345 SEC23BQ15437 767 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 TMEM107Q6UX40 140 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 PLEKHG7Q6ZR37 379 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 ZNF784Q8NCA9 323 aaPredicted RBP12.87□□□□□ -0.35
CDH8-201ENST00000299345 OR4E2Q8NGC2 313 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 SLC7A13Q8TCU3 470 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 SIGLEC11Q96RL6 698 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 POLR2J2Q9GZM3 115 aaKnown RBP12.87□□□□□ -0.35
CDH8-201ENST00000299345 KLHL25Q9H0H3 589 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 RNF167Q9H6Y7 350 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 OBP2AQ9NY56 170 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 EHD3Q9NZN3 535 aa12.87□□□□□ -0.35
CDH8-201ENST00000299345 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.87□□□□□ -0.35
CDH8-201ENST00000299345 SNTNA6NMZ2 147 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 MYL12AP19105 171 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 BCL6P41182 706 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 ABATP80404 500 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 GINS1Q14691 196 aa12.86□□□□□ -0.35
CDH8-201ENST00000299345 GPR19Q15760 415 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms