RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 RAB26Q9ULW5 256 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 OAZ3Q9UMX2 235 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 PLCL2Q9UPR0 1127 aa14.64□□□□□ -0.07
LSM6-201ENST00000296581 SOCS2O14508 198 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 TRMUO75648 421 aaKnown RBP14.63□□□□□ -0.07
LSM6-201ENST00000296581 OXSR1O95747 527 aaPredicted RBP14.63□□□□□ -0.07
LSM6-201ENST00000296581 SLC5A2P31639 672 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 PCBP3P57721 371 aaKnown RBP14.63□□□□□ -0.07
LSM6-201ENST00000296581 CAMK2BQ13554 666 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 SERHL2Q9H4I8 314 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 PDE7BQ9NP56 450 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 ZCCHC3Q9NUD5 404 aaKnown RBP14.63□□□□□ -0.07
LSM6-201ENST00000296581 AK5Q9Y6K8 562 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 SPACA6W5XKT8 324 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 TMEM229AB2RXF0 380 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 CYR61O00622 381 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 B4GAT1O43505 415 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 ZBTB11O95625 1053 aaPredicted RBP14.63□□□□□ -0.07
LSM6-201ENST00000296581 MLLT3P42568 568 aaPredicted RBP14.63□□□□□ -0.07
LSM6-201ENST00000296581 PPM1FP49593 454 aaPredicted RBP14.63□□□□□ -0.07
LSM6-201ENST00000296581 ARPC4P59998 168 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 RPS26P62854 115 aaKnown RBP14.63□□□□□ -0.07
LSM6-201ENST00000296581 GPLD1P80108 840 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 SIM1P81133 766 aaPredicted RBP14.63□□□□□ -0.07
LSM6-201ENST00000296581 TP53BP2Q13625 1128 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 NRF1Q16656 503 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 CYBRD1Q53TN4 286 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 USP53Q70EK8 1073 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 CBR4Q8N4T8 237 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 OR4K14Q8NGD5 310 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 OR10Q1Q8NGQ4 319 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 SAP25Q8TEE9 199 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 AHCYL2Q96HN2 611 aaKnown RBP14.63□□□□□ -0.07
LSM6-201ENST00000296581 HSH2DQ96JZ2 352 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 SLC35G5Q96KT7 338 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 DUSP23Q9BVJ7 150 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 ANKHQ9HCJ1 492 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 ANGPT4Q9Y264 503 aa14.63□□□□□ -0.07
LSM6-201ENST00000296581 C7orf72A4D263 438 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 DENRO43583 198 aaKnown RBP14.62□□□□□ -0.07
LSM6-201ENST00000296581 DUX1O43812 170 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 RASAL1O95294 804 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 CLPTM1O96005 669 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 TMED10P49755 219 aaKnown RBP14.62□□□□□ -0.07
LSM6-201ENST00000296581 CFHR1Q03591 330 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 FOLH1Q04609 750 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 CRB2Q5IJ48 1285 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 TNFAIP8L2Q6P589 184 aaPredicted RBP14.62□□□□□ -0.07
LSM6-201ENST00000296581 BHLHB9Q6PI77 547 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 ZC3H7AQ8IWR0 971 aaKnown RBP14.62□□□□□ -0.07
LSM6-201ENST00000296581 LRRC25Q8N386 305 aaPredicted RBP14.62□□□□□ -0.07
LSM6-201ENST00000296581 OR5T3Q8NGG3 340 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 OR56A1Q8NGH5 318 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 GIPC3Q8TF64 312 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 TBC1D20Q96BZ9 403 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 ITPKCQ96DU7 683 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 IL1RAPQ9NPH3 570 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 ENAMQ9NRM1 1142 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 ADPRHL2Q9NX46 363 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 THUMPD1Q9NXG2 353 aaKnown RBP14.62□□□□□ -0.07
LSM6-201ENST00000296581 SELENONQ9NZV5 590 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 SEMA5BQ9P283 1151 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 MN1Q10571 1320 aaPredicted RBP14.62□□□□□ -0.07
LSM6-201ENST00000296581 ZDBF2Q9HCK1 2354 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 HMGN4O00479 90 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 SUV39H1O43463 412 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 CST1P01037 141 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 FHP07954 510 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 TFPTP0C1Z6 253 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 ALPPL2P10696 532 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 S100A1P23297 94 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 AQP1P29972 269 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 CNR2P34972 360 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 XKP51811 444 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 RAB38P57729 211 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 GPR19Q15760 415 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 NDUFA9Q16795 377 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 HLA-BQ31612 363 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 NIPAL1Q6NVV3 410 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 VTCN1Q7Z7D3 282 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 PLXDC1Q8IUK5 500 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 ZDHHC21Q8IVQ6 265 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 OR9A2Q8NGT5 310 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 ELP4Q96EB1 424 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 SOHLH2Q9NX45 425 aa14.62□□□□□ -0.07
LSM6-201ENST00000296581 SGK494L7N484 410 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 YKT6O15498 198 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 EMC8O43402 210 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 RDH16O75452 317 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 MED26O95402 600 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 PTGER1P34995 402 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 SELENOWP63302 87 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 SHC2P98077 582 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 FAM53BQ14153 422 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 MAPK11Q15759 364 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 INAVAQ3KP66 663 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 TCTE1Q5JU00 501 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 GARNL3Q5VVW2 1013 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 REEP3Q6NUK4 255 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 TMEM107Q6UX40 140 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms