RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 DDX5P17844 614 aaKnown RBP6.07□□□□□ -1.44
CD44-204ENST00000279452 PRPH2P23942 346 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 TACR1P25103 407 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 MPIP34949 423 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 CD96P40200 585 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 ASMTP46597 345 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 TNFSF10P50591 281 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 HK2P52789 917 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 SLC18A1P54219 525 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 MLF1P58340 268 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 MRPS35P82673 323 aaKnown RBP6.07□□□□□ -1.44
CD44-204ENST00000279452 DUSP2Q05923 314 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 ZNF155Q12901 538 aaPredicted RBP6.07□□□□□ -1.44
CD44-204ENST00000279452 HSPB3Q12988 150 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 MAD2L1Q13257 205 aaPredicted RBP6.07□□□□□ -1.44
CD44-204ENST00000279452 EXOSC7Q15024 291 aaKnown RBP6.07□□□□□ -1.44
CD44-204ENST00000279452 MAPKAPK3Q16644 382 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 SPRED3Q2MJR0 410 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 UGT3A2Q3SY77 523 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 PLEKHN1Q494U1 663 aaPredicted RBP6.07□□□□□ -1.44
CD44-204ENST00000279452 XKR7Q5GH72 579 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 ZNF766Q5HY98 468 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 IL23RQ5VWK5 629 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 SPINK14Q6IE38 97 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 GALNT18Q6P9A2 607 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 FAM111BQ6SJ93 734 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 TMEM107Q6UX40 140 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 IL20RBQ6UXL0 311 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 Q6ZS92 163 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 RNF165Q6ZSG1 346 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 Q6ZSR9 355 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 ATCAYQ86WG3 371 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 C9orf40Q8IXQ3 194 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 LGI4Q8N135 537 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 CYP4Z2PQ8N1L4 340 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 CISD2Q8N5K1 135 aaKnown RBP6.07□□□□□ -1.44
CD44-204ENST00000279452 TMEM178AQ8NBL3 297 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 FAM98AQ8NCA5 519 aaKnown RBP6.07□□□□□ -1.44
CD44-204ENST00000279452 OR5M3Q8NGP4 307 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 OR6Y1Q8NGX8 325 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 ZFP28Q8NHY6 868 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 RAB3IL1Q8TBN0 382 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 CPT1CQ8TCG5 803 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 ZNF721Q8TF20 911 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 HAS2Q92819 552 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 KAT2AQ92830 837 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 CNRIP1Q96F85 164 aaPredicted RBP6.07□□□□□ -1.44
CD44-204ENST00000279452 METTL2AQ96IZ6 378 aaKnown RBP6.07□□□□□ -1.44
CD44-204ENST00000279452 EGLN2Q96KS0 407 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 C3orf30Q96M34 536 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 SIGLEC12Q96PQ1 595 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 SORT1Q99523 831 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 NPAS2Q99743 824 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 SH3GL2Q99962 352 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 CXorf21Q9HAI6 301 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 SLC35C2Q9NQQ7 365 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 DDX18Q9NVP1 670 aaKnown RBP6.07□□□□□ -1.44
CD44-204ENST00000279452 THAP1Q9NVV9 213 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 HPF1Q9NWY4 346 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 NOP53Q9NZM5 478 aaKnown RBP6.07□□□□□ -1.44
CD44-204ENST00000279452 MYOTQ9UBF9 498 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 VPS4AQ9UN37 437 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.07□□□□□ -1.44
CD44-204ENST00000279452 YARS2Q9Y2Z4 477 aaKnown RBP6.07□□□□□ -1.44
CD44-204ENST00000279452 CCL27Q9Y4X3 112 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 COPG1Q9Y678 874 aaKnown RBP6.07□□□□□ -1.44
CD44-204ENST00000279452 SCN3AQ9NY46 2000 aa6.07□□□□□ -1.44
CD44-204ENST00000279452 KMT2BQ9UMN6 2715 aaPredicted RBP6.07□□□□□ -1.44
CD44-204ENST00000279452 EPG5Q9HCE0 2579 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 OR6C76A6NM76 312 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 TRPC5OSA6NMA1 111 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 G3V3Y1 287 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 J3QKU1 62 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 SCAMP2O15127 329 aaKnown RBP6.06□□□□□ -1.44
CD44-204ENST00000279452 CFLARO15519 480 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 PRAMEF2O60811 474 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 DIAPH2O60879 1101 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 SORBS2O94875 1100 aaKnown RBP6.06□□□□□ -1.44
CD44-204ENST00000279452 OR6B1O95007 311 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 RASAL1O95294 804 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 ATP1B1P05026 303 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 PRPS2P11908 318 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 PLA2G2AP14555 144 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 PCSK2P16519 638 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 LBPP18428 481 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 EFNA1P20827 205 aaPredicted RBP6.06□□□□□ -1.44
CD44-204ENST00000279452 SOAT1P35610 550 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 RPL3P39023 403 aaKnown RBP6.06□□□□□ -1.44
CD44-204ENST00000279452 SOX3P41225 446 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 HLCSP50747 726 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 NR0B1P51843 470 aaKnown RBP6.06□□□□□ -1.44
CD44-204ENST00000279452 NME5P56597 212 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 NRG3P56975 720 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 GPR85P60893 370 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 PMP22Q01453 160 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 ELOAQ14241 798 aaKnown RBP6.06□□□□□ -1.44
CD44-204ENST00000279452 PTGR1Q14914 329 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 KIAA0040Q15053 153 aa6.06□□□□□ -1.44
CD44-204ENST00000279452 EBPQ15125 230 aaKnown RBP6.06□□□□□ -1.44
CD44-204ENST00000279452 INPP5JQ15735 1006 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms