RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 KLHL6Q8WZ60 621 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 EID2BQ96D98 161 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 TMEM80Q96HE8 168 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 SPACA7Q96KW9 195 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 APOLD1Q96LR9 279 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 DMRTB1Q96MA1 342 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 SMIM14Q96QK8 99 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 PIP5K1AQ99755 562 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 TTYH2Q9BSA4 534 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 DUSP26Q9BV47 211 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 ROGDIQ9GZN7 287 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 RSPH9Q9H1X1 276 aaPredicted RBP9.8□□□□□ -0.84
UPF3B-201ENST00000276201 FAM83DQ9H4H8 585 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 BRF2Q9HAW0 419 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 RANGRFQ9HD47 186 aaPredicted RBP9.8□□□□□ -0.84
UPF3B-201ENST00000276201 PLSCR3Q9NRY6 295 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 B3GNT2Q9NY97 397 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 KCND3Q9UK17 655 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 VPS4AQ9UN37 437 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 KLHL20Q9Y2M5 609 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 USP34Q70CQ2 3546 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 A0A0G2JMP0 313 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 POLR1CO15160 346 aaPredicted RBP9.8□□□□□ -0.84
UPF3B-201ENST00000276201 TPST2O60704 377 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 PRAMEF1O95521 474 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 CD160O95971 181 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 ADAP00813 363 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 ADRA2AP08913 450 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 CKMT1AP12532 417 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 ZNF30P17039 623 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 AOAHP28039 575 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 HOXD11P31277 338 aaPredicted RBP9.8□□□□□ -0.84
UPF3B-201ENST00000276201 NNMTP40261 264 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 CSNK1DP48730 415 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 AP1S2P56377 157 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 SPIBQ01892 262 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 EEF1A2Q05639 463 aaKnown RBP9.8□□□□□ -0.84
UPF3B-201ENST00000276201 PTGES3Q15185 160 aaKnown RBP9.8□□□□□ -0.84
UPF3B-201ENST00000276201 MED22Q15528 200 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 OCLNQ16625 522 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 PMS2CLQ68D20 193 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 ZNF776Q68DI1 518 aaPredicted RBP9.8□□□□□ -0.84
UPF3B-201ENST00000276201 FRMPD2BQ6IN97 320 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 IDO2Q6ZQW0 420 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 RFPL4BQ6ZWI9 263 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 CCDC28AQ8IWP9 274 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 OR9Q1Q8NGQ5 310 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 WDR36Q8NI36 951 aaKnown RBP9.8□□□□□ -0.84
UPF3B-201ENST00000276201 CREB3L4Q8TEY5 395 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 FAM129BQ96TA1 746 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 NIPSNAP1Q9BPW8 284 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 CNPPD1Q9BV87 410 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 C11orf54Q9H0W9 315 aaPredicted RBP9.8□□□□□ -0.84
UPF3B-201ENST00000276201 MIXL1Q9H2W2 232 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 AMBNQ9NP70 447 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 ATP13A2Q9NQ11 1180 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 ACER3Q9NUN7 267 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 DNAJC11Q9NVH1 559 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 ATP6V1HQ9UI12 483 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 SSR3Q9UNL2 185 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 PCDHGB7Q9Y5F8 929 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 ACTL7AQ9Y615 435 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 AUP1Q9Y679 476 aa9.8□□□□□ -0.84
UPF3B-201ENST00000276201 NUP214P35658 2090 aaPredicted RBP9.8□□□□□ -0.84
UPF3B-201ENST00000276201 ZNF292O60281 2723 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 ICMTO60725 284 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 ZNF217O75362 1048 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 IGLV3-19P01714 112 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 HSMCR30P0CW71 290 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 DDX5P17844 614 aaKnown RBP9.79□□□□□ -0.84
UPF3B-201ENST00000276201 RHCEP18577 417 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 ALAS2P22557 587 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 RPIAP49247 311 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 TPMTP51580 245 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 ILKQ13418 452 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 SPHARQ15513 63 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 CDKN3Q16667 212 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 C12orf73Q69YU5 71 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 ZNF770Q6IQ21 691 aaPredicted RBP9.79□□□□□ -0.84
UPF3B-201ENST00000276201 Q6ZVU0 165 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 PTCHD4Q6ZW05 846 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 NXPE1Q8N323 547 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 OR52N2Q8NGI0 321 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 AP2M1Q96CW1 435 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 DPH2Q9BQC3 489 aaPredicted RBP9.79□□□□□ -0.84
UPF3B-201ENST00000276201 BHLHE41Q9C0J9 482 aaPredicted RBP9.79□□□□□ -0.84
UPF3B-201ENST00000276201 ASB8Q9H765 288 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 RLIMQ9NVW2 624 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 NCDNQ9UBB6 729 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 NUFIP1Q9UHK0 495 aaKnown RBP9.79□□□□□ -0.84
UPF3B-201ENST00000276201 ENPP4Q9Y6X5 453 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 FRYLO94915 3013 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 THADAQ6YHU6 1953 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 IGLV3-16A0A075B6K0 115 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 A0A0B4J293 547 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 B8ZZF3 427 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 SLC43A1O75387 559 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 CSO75390 466 aaKnown RBP9.79□□□□□ -0.84
UPF3B-201ENST00000276201 FAM157BP0CG42 384 aa9.79□□□□□ -0.84
UPF3B-201ENST00000276201 MVDP53602 400 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms