RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 NEIL2Q969S2 332 aa8.99□□□□□ -0.97
LRTM1-201ENST00000273286 PYCR2Q96C36 320 aa8.99□□□□□ -0.97
LRTM1-201ENST00000273286 LRRC39Q96DD0 335 aa8.99□□□□□ -0.97
LRTM1-201ENST00000273286 CERS2Q96G23 380 aa8.99□□□□□ -0.97
LRTM1-201ENST00000273286 VMP1Q96GC9 406 aa8.99□□□□□ -0.97
LRTM1-201ENST00000273286 FAR2Q96K12 515 aa8.99□□□□□ -0.97
LRTM1-201ENST00000273286 OR4K3Q96R72 315 aa8.99□□□□□ -0.97
LRTM1-201ENST00000273286 NPLQ9BXD5 320 aaPredicted RBP8.99□□□□□ -0.97
LRTM1-201ENST00000273286 CAPS2Q9BXY5 557 aa8.99□□□□□ -0.97
LRTM1-201ENST00000273286 PITHD1Q9GZP4 211 aaPredicted RBP8.99□□□□□ -0.97
LRTM1-201ENST00000273286 PPIEQ9UNP9 301 aaKnown RBP8.99□□□□□ -0.97
LRTM1-201ENST00000273286 DCHS2Q6V1P9 2916 aa8.99□□□□□ -0.97
LRTM1-201ENST00000273286 TUBB4AP04350 444 aa8.98□□□□□ -0.97
LRTM1-201ENST00000273286 TPOP07202 933 aa8.98□□□□□ -0.97
LRTM1-201ENST00000273286 SMIM10L1P0DMW3 83 aa8.98□□□□□ -0.97
LRTM1-201ENST00000273286 GNAZP19086 355 aa8.98□□□□□ -0.97
LRTM1-201ENST00000273286 RPS19P39019 145 aaKnown RBP8.98□□□□□ -0.97
LRTM1-201ENST00000273286 CDKN2DP55273 166 aa8.98□□□□□ -0.97
LRTM1-201ENST00000273286 REEP5Q00765 189 aa8.98□□□□□ -0.97
LRTM1-201ENST00000273286 TIAL1Q01085 375 aaKnown RBP eCLIP8.98□□□□□ -0.97
LRTM1-201ENST00000273286 TLE4Q04727 773 aa8.98□□□□□ -0.97
LRTM1-201ENST00000273286 FOXE3Q13461 319 aa8.98□□□□□ -0.97
LRTM1-201ENST00000273286 PPP1R7Q15435 360 aa8.98□□□□□ -0.97
LRTM1-201ENST00000273286 CATSPEREQ5SY80 951 aa8.98□□□□□ -0.97
LRTM1-201ENST00000273286 RNASEH2BQ5TBB1 312 aaKnown RBP8.98□□□□□ -0.97
LRTM1-201ENST00000273286 MEX3BQ6ZN04 569 aaKnown RBP8.98□□□□□ -0.97
LRTM1-201ENST00000273286 CHERPQ8IWX8 916 aaKnown RBP8.98□□□□□ -0.97
LRTM1-201ENST00000273286 PDIK1LQ8N165 341 aa8.98□□□□□ -0.97
LRTM1-201ENST00000273286 NKAPQ8N5F7 415 aaKnown RBP8.98□□□□□ -0.97
LRTM1-201ENST00000273286 NFAM1Q8NET5 270 aaPredicted RBP8.98□□□□□ -0.97
LRTM1-201ENST00000273286 OR14K1Q8NGZ2 314 aa8.98□□□□□ -0.97
LRTM1-201ENST00000273286 ACTRT1Q8TDG2 376 aa8.98□□□□□ -0.97
LRTM1-201ENST00000273286 SMIM10Q96HG1 83 aa8.98□□□□□ -0.97
LRTM1-201ENST00000273286 PPANQ9NQ55 473 aaKnown RBP8.98□□□□□ -0.97
LRTM1-201ENST00000273286 YARS2Q9Y2Z4 477 aaKnown RBP8.98□□□□□ -0.97
LRTM1-201ENST00000273286 VWA7Q9Y334 891 aa8.98□□□□□ -0.97
LRTM1-201ENST00000273286 HIVEP1P15822 2718 aa8.98□□□□□ -0.97
LRTM1-201ENST00000273286 CELSR1Q9NYQ6 3014 aa8.98□□□□□ -0.97
LRTM1-201ENST00000273286 TRBV11-1A0A0K0K1C0 115 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 A0A1B0GTH9 108 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 A8MVJ9 347 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 C19orf84I3L1E1 186 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 CES2O00748 559 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 DNALI1O14645 258 aaPredicted RBP8.97□□□□□ -0.97
LRTM1-201ENST00000273286 ADAM10O14672 748 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 PEX1O43933 1283 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 H2AFYO75367 372 aaKnown RBP8.97□□□□□ -0.97
LRTM1-201ENST00000273286 ITGA10O75578 1167 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 WISP2O76076 250 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 GUCA1CO95843 209 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 F7P08709 466 aaPredicted RBP8.97□□□□□ -0.97
LRTM1-201ENST00000273286 CD1EP15812 388 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 ZNF37AP17032 561 aaPredicted RBP8.97□□□□□ -0.97
LRTM1-201ENST00000273286 MAOAP21397 527 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 GABRB3P28472 473 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 SSR4P51571 173 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 RAB8AP61006 207 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 OLR1P78380 273 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 BTG2P78543 158 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 FRG1Q14331 258 aaKnown RBP8.97□□□□□ -0.97
LRTM1-201ENST00000273286 RBBP5Q15291 538 aaKnown RBP8.97□□□□□ -0.97
LRTM1-201ENST00000273286 PPP1R3AQ16821 1122 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 RBM20Q5T481 1227 aaKnown RBP8.97□□□□□ -0.97
LRTM1-201ENST00000273286 HECTD2Q5U5R9 776 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 ABHD17CQ6PCB6 329 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 FGD2Q7Z6J4 655 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 TMPRSS11BQ86T26 416 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 ADAMTSL2Q86TH1 951 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 THOC6Q86W42 341 aaKnown RBP8.97□□□□□ -0.97
LRTM1-201ENST00000273286 ZNF595Q8IYB9 648 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 KRT78Q8N1N4 520 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 KIF2BQ8N4N8 673 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 RND1Q92730 232 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 SLCO2A1Q92959 643 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 VPS39Q96JC1 886 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 HPF1Q9NWY4 346 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 NSMCE4AQ9NXX6 385 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 ASIC3Q9UHC3 531 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 ITGB1BP2Q9UKP3 347 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 SLC22A14Q9Y267 594 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 PPP2R2CQ9Y2T4 447 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 MTORP42345 2549 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 NPIPB8E9PQR5 432 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 HS6ST1O60243 411 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 ZFAND5O76080 213 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 MYO1DO94832 1006 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 IGFBP2P18065 325 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 SDHAP31040 664 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 PTGER1P34995 402 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 HSF1Q00613 529 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 IRF9Q00978 393 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 TGM3Q08188 693 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 KLF10Q13118 480 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 EFTUD2Q15029 972 aaKnown RBP eCLIP8.97□□□□□ -0.97
LRTM1-201ENST00000273286 ELAVL1Q15717 326 aaKnown RBP8.97□□□□□ -0.97
LRTM1-201ENST00000273286 TMEM177Q53S58 311 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 CMPK2Q5EBM0 449 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 TEDDM1Q5T9Z0 273 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 NDUFAF5Q5TEU4 345 aa8.97□□□□□ -0.97
LRTM1-201ENST00000273286 SBSNQ6UWP8 590 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms