RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 EGFL6Q8IUX8 553 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 CCDC116Q8IYX3 515 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 SDR16C5Q8N3Y7 309 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 DEFB119Q8N690 84 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 GEMIN6Q8WXD5 167 aaKnown RBP14.45□□□□□ -0.1
SF3B4-201ENST00000271628 ABTB1Q969K4 478 aaPredicted RBP14.45□□□□□ -0.1
SF3B4-201ENST00000271628 CLDN23Q96B33 292 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 THSD1Q9NS62 852 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 P2RX2Q9UBL9 471 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 RAB23Q9ULC3 237 aa14.45□□□□□ -0.1
SF3B4-201ENST00000271628 WASHC1A8K0Z3 465 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 H0YGG7 62 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 TMX2-CTNND1H3BSU7 103 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 HMGN4O00479 90 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 B4GALT2O60909 372 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 DIRAS1O95057 198 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 C9P02748 559 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 BCHEP06276 602 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 FHP07954 510 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 ZNF12P17014 697 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 CPN2P22792 545 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 RYKP34925 604 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 FASLGP48023 281 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 C21orf59P57076 290 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 ARF3P61204 181 aaPredicted RBP14.44□□□□□ -0.1
SF3B4-201ENST00000271628 ISL1P61371 349 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 RPS26P62854 115 aaKnown RBP14.44□□□□□ -0.1
SF3B4-201ENST00000271628 FRMPD2BQ6IN97 320 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 SFTPA2Q8IWL1 248 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 OR56A1Q8NGH5 318 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 SUN3Q8TAQ9 357 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 ZNF607Q96SK3 696 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.44□□□□□ -0.1
SF3B4-201ENST00000271628 LHPPQ9H008 270 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 UCK1Q9HA47 277 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 C3orf14Q9HBI5 128 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 VNN3Q9NY84 501 aa14.44□□□□□ -0.1
SF3B4-201ENST00000271628 TDRD6O60522 2096 aaKnown RBP14.43□□□□□ -0.1
SF3B4-201ENST00000271628 CBFA2T3O75081 653 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 CCDC159P0C7I6 412 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 ZNF182P17025 639 aaPredicted RBP14.43□□□□□ -0.1
SF3B4-201ENST00000271628 ALOX12P18054 663 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 CD247P20963 164 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 IGFBP5P24593 272 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 PPP2R1BP30154 601 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 PIGAP37287 484 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 HNRNPKP61978 463 aaKnown RBP eCLIP14.43□□□□□ -0.16e-6■□□□□ 9
SF3B4-201ENST00000271628 TNFRSF17Q02223 184 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 BNIP3Q12983 259 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 GNA13Q14344 377 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 DEFB134Q4QY38 66 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 ZNF691Q5VV52 312 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 SZRD1Q7Z422 152 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 TMEM19Q96HH6 336 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 ZNF681Q96N22 645 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 KLHL25Q9H0H3 589 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 SEMA6CQ9H3T2 930 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 TBC1D17Q9HA65 648 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 RHBDL2Q9NX52 303 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 NDUFAF4Q9P032 175 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 PDP1Q9P0J1 537 aaPredicted RBP14.43□□□□□ -0.1
SF3B4-201ENST00000271628 POMT2Q9UKY4 750 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 DAPP1Q9UN19 280 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 SNX5Q9Y5X3 404 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 SPACA6W5XKT8 324 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 LOC105369274A0A096LPK9 316 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 LOC102723532A0A0G2JNH3 316 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 P2RX6O15547 441 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 IL7RP16871 459 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 MAOBP27338 520 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 RRM2P31350 389 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 FEN1P39748 380 aaKnown RBP14.43□□□□□ -0.1
SF3B4-201ENST00000271628 LSSP48449 732 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 KHKP50053 298 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 CD47Q08722 323 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 MEP1AQ16819 746 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.43□□□□□ -0.1
SF3B4-201ENST00000271628 KDM4DQ6B0I6 523 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 CEP68Q76N32 757 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 OR4N4Q8N0Y3 316 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 PIK3C3Q8NEB9 887 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 BPIFB6Q8NFQ5 453 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 ZCCHC10Q8TBK6 192 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 LMX1AQ8TE12 382 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 ZNF566Q969W8 418 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 PLEKHA8Q96JA3 519 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 ZNF300Q96RE9 604 aaPredicted RBP14.43□□□□□ -0.1
SF3B4-201ENST00000271628 MIR1-1HGQ9H1L0 117 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 OR51I1Q9H343 314 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 LYRM4Q9HD34 91 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 EVA1BQ9NVM1 165 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 KCMF1Q9P0J7 381 aa14.43□□□□□ -0.1
SF3B4-201ENST00000271628 TMEFF2Q9UIK5 374 aaPredicted RBP14.43□□□□□ -0.1
SF3B4-201ENST00000271628 EMC8O43402 210 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 UGT2B11O75310 529 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 SERPINB7O75635 380 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 UBXN7O94888 489 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 EIF2S1P05198 315 aaKnown RBP14.42□□□□□ -0.1
SF3B4-201ENST00000271628 PVRP15151 417 aa14.42□□□□□ -0.1
SF3B4-201ENST00000271628 LIM2P55344 173 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms