RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 SMLR1H3BR10 107 aa26.04■■□□□ 1.76
CBX4-201ENST00000269397 GRM6O15303 877 aa26.04■■□□□ 1.76
CBX4-201ENST00000269397 HTR2BP41595 481 aa26.04■■□□□ 1.76
CBX4-201ENST00000269397 RECQLP46063 649 aaPredicted RBP26.04■■□□□ 1.76
CBX4-201ENST00000269397 GNG2P59768 71 aa26.04■■□□□ 1.76
CBX4-201ENST00000269397 SNRPD2P62316 118 aaKnown RBP26.04■■□□□ 1.76
CBX4-201ENST00000269397 TAP2Q03519 686 aa26.04■■□□□ 1.76
CBX4-201ENST00000269397 ADGRF3Q8IZF5 1079 aa26.04■■□□□ 1.76
CBX4-201ENST00000269397 ZNF582Q96NG8 517 aaPredicted RBP26.04■■□□□ 1.76
CBX4-201ENST00000269397 SCN5AQ14524 2016 aa26.04■■□□□ 1.76
CBX4-201ENST00000269397 MMP11P24347 488 aa26.04■■□□□ 1.76
CBX4-201ENST00000269397 IRS1P35568 1242 aa26.04■■□□□ 1.76
CBX4-201ENST00000269397 SYPL1Q16563 259 aa26.04■■□□□ 1.76
CBX4-201ENST00000269397 OCLNQ16625 522 aa26.04■■□□□ 1.76
CBX4-201ENST00000269397 TYW3Q6IPR3 259 aaKnown RBP26.04■■□□□ 1.76
CBX4-201ENST00000269397 PLET1Q6UQ28 207 aa26.04■■□□□ 1.76
CBX4-201ENST00000269397 NXPE4Q6UWF7 544 aa26.04■■□□□ 1.76
CBX4-201ENST00000269397 C6orf120Q7Z4R8 191 aa26.04■■□□□ 1.76
CBX4-201ENST00000269397 AP2M1Q96CW1 435 aa26.04■■□□□ 1.76
CBX4-201ENST00000269397 ACOXLQ9NUZ1 547 aa26.04■■□□□ 1.76
CBX4-201ENST00000269397 TMEM39AQ9NV64 488 aa26.04■■□□□ 1.76
CBX4-201ENST00000269397 A0A0G2JMP0 313 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 FAM25AB3EWG3 89 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 FAM25CB3EWG5 89 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 FAM25GB3EWG6 89 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 NCR1O76036 304 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 TIMP2P16035 220 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 FAM209AQ5JX71 171 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 ZER1Q7Z7L7 766 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 GALNT6Q8NCL4 622 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 MLLT3P42568 568 aaPredicted RBP26.03■■□□□ 1.76
CBX4-201ENST00000269397 GRIN2CQ14957 1233 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 SNAPC1Q16533 368 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 UNC5DQ6UXZ4 953 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 IQCHQ86VS3 1027 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 OR5D16Q8NGK9 328 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 UCN3Q969E3 161 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 TIFAQ96CG3 184 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 NEURL3Q96EH8 262 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 RIPOR3Q96MK2 946 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 ANKRA2Q9H9E1 313 aa26.03■■□□□ 1.76
CBX4-201ENST00000269397 HMGN4O00479 90 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 AKR7A2O43488 359 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 SLC28A2O43868 658 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 HPGDSO60760 199 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 EPHX1P07099 455 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 SLC2A2P11168 524 aaPredicted RBP26.02■■□□□ 1.76
CBX4-201ENST00000269397 PTGER1P34995 402 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 FABP5Q01469 135 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 GPR19Q15760 415 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 LCN1P1Q5VSP4 162 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 TRMT11Q7Z4G4 463 aaKnown RBP26.02■■□□□ 1.76
CBX4-201ENST00000269397 TRAPPC5Q8IUR0 188 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 EXOSC8Q96B26 276 aaKnown RBP26.02■■□□□ 1.76
CBX4-201ENST00000269397 ZNF354BQ96LW1 612 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 DCLRE1CQ96SD1 692 aaKnown RBP26.02■■□□□ 1.76
CBX4-201ENST00000269397 GIMAP4Q9NUV9 329 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 NLKQ9UBE8 527 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 TESQ9UGI8 421 aaKnown RBP26.02■■□□□ 1.76
CBX4-201ENST00000269397 A4GNTQ9UNA3 340 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 ALG5Q9Y673 324 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 OBSL1O75147 1896 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 LGI1O95970 557 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 MYL12AP19105 171 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 XPAP23025 273 aaPredicted RBP26.02■■□□□ 1.76
CBX4-201ENST00000269397 SOX18P35713 384 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 WNT4P56705 351 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 INSL4Q14641 139 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 Q8N402 240 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 SLC9A6Q92581 669 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 ZBED6CLQ96FA7 236 aaPredicted RBP26.02■■□□□ 1.76
CBX4-201ENST00000269397 PLA2G12AQ9BZM1 189 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 KCNK12Q9HB15 430 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 SPG21Q9NZD8 308 aa26.02■■□□□ 1.76
CBX4-201ENST00000269397 OR12D1P0DN82 309 aa26.01■■□□□ 1.76
CBX4-201ENST00000269397 KCNJ5P48544 419 aa26.01■■□□□ 1.76
CBX4-201ENST00000269397 GIPRP48546 466 aa26.01■■□□□ 1.76
CBX4-201ENST00000269397 PNLIPRP1P54315 467 aa26.01■■□□□ 1.76
CBX4-201ENST00000269397 DCDC1P59894 354 aa26.01■■□□□ 1.76
CBX4-201ENST00000269397 FAPQ12884 760 aa26.01■■□□□ 1.76
CBX4-201ENST00000269397 CNIH2Q6PI25 160 aa26.01■■□□□ 1.76
CBX4-201ENST00000269397 HSDL2Q6YN16 418 aa26.01■■□□□ 1.76
CBX4-201ENST00000269397 FAM26EQ8N5C1 309 aa26.01■■□□□ 1.76
CBX4-201ENST00000269397 MTERF3Q96E29 417 aa26.01■■□□□ 1.76
CBX4-201ENST00000269397 TEFMQ96QE5 360 aaKnown RBP26.01■■□□□ 1.76
CBX4-201ENST00000269397 GFM1Q96RP9 751 aaKnown RBP26.01■■□□□ 1.76
CBX4-201ENST00000269397 TMEM245Q9H330 911 aa26.01■■□□□ 1.76
CBX4-201ENST00000269397 EGLN3Q9H6Z9 239 aa26.01■■□□□ 1.76
CBX4-201ENST00000269397 A4GALTQ9NPC4 353 aa26.01■■□□□ 1.76
CBX4-201ENST00000269397 A0A0X1KG70 313 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 PLPP1O14494 284 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 CTSLP07711 333 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 RAB33AQ14088 237 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 PLK5Q496M5 336 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 ZNF628Q5EBL2 1059 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 ZNF730Q6ZMV8 503 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 FAM92BQ6ZTR7 304 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 SLC43A3Q8NBI5 491 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 C19orf18Q8NEA5 215 aa26.01■■□□□ 1.75
CBX4-201ENST00000269397 OR4K5Q8NGD3 323 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms